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SCNpilot_cont_300_bf_scaffold_3282_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3282_curated_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..576
DNA (576bp) protein (192aa)
type 12 methyltransferase; K15256 tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
Methyltransferase type 12 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRQ9_PARL1
Methyltransferase type 12 {ECO:0000313|EMBL:ABS62592.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_300_bf_scaffold_3282_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(664..1197)
DNA (534bp) protein (178aa)
H+-transporting two-sector ATPase subunit B/B'; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
ATP synthase subunit b 1 n=3 Tax=Rhodospirillum rubrum PF1_RHORT">RepID=ATPF1_RHORT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3282_curated_3
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1194..1772)
DNA (579bp) protein (193aa)
atpG1; ATP synthase subunit b'; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
ATP synthase subunit b n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SMB4_RHOPH
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000313|EMBL:CCG06797.1}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
SCNpilot_cont_300_bf_scaffold_3282_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1799..2026)
DNA (228bp) protein (76aa)
ATP synthase F0 C subunit; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
F0F1 ATP synthase subunit C n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00035DCFC2
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3282_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2059..2787)
DNA (729bp) protein (243aa)
ATP synthase subunit a n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TPC9_TISMK
atpB; F0F1-type ATP synthase, subunit a
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3282_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2827..3189)
DNA (363bp) protein (121aa)
ATP synthase protein I n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H4V6_9PROT
hypothetical protein; K02116 ATP synthase protein I
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3282_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3316..5523)
DNA (2208bp) protein (736aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036F9873
rhodanese domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3282_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5723..7570
DNA (1848bp) protein (616aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00037F4859
transglycosylase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3282_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8083..9246
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00037D4D7E
CAIB/BAIF family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3282_curated_10
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9243..9854
DNA (612bp) protein (204aa)
Cysteine dioxygenase type I n=1 Tax=Achromobacter piechaudii HLE RepID=J4YJU4_9BURK
Cysteine dioxygenase type I {ECO:0000313|EMBL:EJO29991.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii HLE.;"
cysteine dioxygenase type I
SCNpilot_cont_300_bf_scaffold_3282_curated_11
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9957..10928
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FAT5_9BURK
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:KCB38428.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
extra-cytoplasmic solute receptor family protein 12
SCNpilot_cont_300_bf_scaffold_3282_curated_12
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10925..11416
DNA (492bp) protein (164aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
SCNpilot_cont_300_bf_scaffold_3282_curated_13
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11427..12911
DNA (1485bp) protein (495aa)
hypothetical protein id=14625701 bin=bin7_NC10_sister species=Bradyrhizobium elkanii genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K07793 putative tricarboxylic transport membrane protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
SCNpilot_cont_300_bf_scaffold_3282_curated_14
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12914..13192)
DNA (279bp) protein (93aa)
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z3F7_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EIM30749.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
transcriptional regulator
Displaying 14 items

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