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SCNpilot_cont_300_bf_scaffold_1375_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1375_curated_1
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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3..272
DNA (270bp) protein (90aa)
Alpha/beta hydrolase fold protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U895_9CHLR
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EFH80106.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
alpha/beta fold family hydrolase
SCNpilot_cont_300_bf_scaffold_1375_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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538..1674
DNA (1137bp) protein (379aa)
ada; O6-methylguanine-DNA methyltransferase (EC:2.1.1.63); K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
Methyltransferase Ada n=1 Tax=Paracoccus pantotrophus RepID=Q93PW3_PARPN
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1375_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1608..2276)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002D741A2
Smr protein/MutS2
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1375_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2324..3679
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B67B86
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1375_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3742..4437
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AG93_AZOBR
conserved protein of unknown function; putative PLP-binding barrel domain
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1375_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4430..5269
DNA (840bp) protein (280aa)
fpg; formamidopyrimidine-DNA glycosylase; K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Formamidopyrimidine-DNA glycosylase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J9M1_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1375_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5345..6127
DNA (783bp) protein (261aa)
enoyl-CoA hydratase/carnithine racemase; K01692 enoyl-CoA hydratase [EC:4.2.1.17]
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TXE9_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1375_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6215..6478
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NY29_AZOS1
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1375_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7070..7534
DNA (465bp) protein (155aa)
Rhodanese domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HNZ2_PARL1
rhodanese domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1375_curated_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7531..9015
DNA (1485bp) protein (495aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U2J7_9PROT
dnaA; chromosomal replication initiation protein; K02313 chromosomal replication initiator protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1375_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9226..10344
DNA (1119bp) protein (373aa)
DNA polymerase III subunit beta n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AS72_AZOBR
dnaN; DNA polymerase III, beta-subunit
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1375_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10341..11567
DNA (1227bp) protein (409aa)
DNA replication and repair protein RecF n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NY86_AZOS1
recF; DNA replication and repair protein; K03629 DNA replication and repair protein RecF
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1375_curated_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11592..14075
DNA (2484bp) protein (828aa)
gyrB; DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase subunit B n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TLC8_PHAFV
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1375_curated_14
unknown

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14068..14667
DNA (600bp) protein (200aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1375_curated_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14854..15246)
DNA (393bp) protein (131aa)
phenylacetic acid degradation protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035D040E
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 15 items

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