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SCNpilot_cont_300_bf_scaffold_1378_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1378_curated_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1246)
DNA (1245bp) protein (415aa)
putative acyl-CoA dehydrogenase (EC:1.3.99.-)
Putative acyl-CoA dehydrogenase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5AQW2_9ACTN
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1378_curated_2
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1260..2405)
DNA (1146bp) protein (382aa)
putative acyl-CoA dehydrogenase (EC:1.3.99.-)
Putative acyl-CoA dehydrogenase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A3M0_9ACTN
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ETR76201.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCNpilot_cont_300_bf_scaffold_1378_curated_3
Mycobacterium gilvum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2483..5665)
DNA (3183bp) protein (1061aa)
endoglucanase; K01179 endoglucanase [EC:3.2.1.4]; K01183 chitinase [EC:3.2.1.14]
Endoglucanase {ECO:0000256|RuleBase:RU361153}; EC=3.2.1.4 {ECO:0000256|RuleBase:RU361153};; Flags: Precursor;; TaxID=278137 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain Spyr1).;"
Endoglucanase n=1 Tax=Mycobacterium sp. (strain Spyr1) RepID=E6TH39_MYCSR
SCNpilot_cont_300_bf_scaffold_1378_curated_4
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5903..6991
DNA (1089bp) protein (363aa)
Putative two-component sensor histidine kinase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I0V2_AZOC5
two-component sensor histidine kinase
Putative two-component sensor histidine kinase {ECO:0000313|EMBL:BAF87298.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_300_bf_scaffold_1378_curated_5
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6979..7692
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003766250
two-component system regulatory protein; K02477 two-component system, LytT family, response regulator
Two-component system regulatory protein {ECO:0000313|EMBL:BAF87297.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_300_bf_scaffold_1378_curated_6
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7726..9312)
DNA (1587bp) protein (529aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YC52_9BRAD
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EIG59927.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
peptide ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_1378_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9477..10343
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000375FA5B
putative carboxyvinyl-carboxyphosphonate phosphorylmutase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1378_curated_8
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10417..10863
DNA (447bp) protein (149aa)
id=3426073 bin=GWC2_Syntrophobacterales_56_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_16_Deltaproteobacteria_58_17_curated
SCNpilot_cont_300_bf_scaffold_1378_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10879..11478)
DNA (600bp) protein (200aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1378_curated_10
unknown

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comp(11486..11821)
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1378_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11959..12606
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2S8N5_9ACTO
tetr family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1378_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12643..13062
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZDJ8_METPB
hypothetical protein; K09796 hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1378_curated_13
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13151..13621
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000361EA26
Protein of unassigned function {ECO:0000313|EMBL:AIQ91240.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1378_curated_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13638..14063)
DNA (426bp) protein (142aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1378_curated_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14100..15569)
DNA (1470bp) protein (490aa)
hypothetical protein n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00036C862E
FAD-binding monooxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1378_curated_16
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15680..16882)
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036FA99B
Putative integral membrane efflux protein {ECO:0000313|EMBL:EDP65847.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
putative integral membrane transport protein
SCNpilot_cont_300_bf_scaffold_1378_curated_17
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17028..17402
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000347133A
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AEG43975.1}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;"
SCNpilot_cont_300_bf_scaffold_1378_curated_18
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

17371..18291
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003799667
Uncharacterized protein {ECO:0000313|EMBL:KDA54178.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
von Willebrand factor A domain-containing protein 5A-like
Displaying 18 items

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