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SCNpilot_cont_300_bf_scaffold_1564_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1564_curated_1
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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184..1338
DNA (1155bp) protein (385aa)
hypothetical protein; K01739 cystathionine gamma-synthase [EC:2.5.1.48]
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4X0L1_RHOS5
Uncharacterized protein {ECO:0000313|EMBL:ABP73175.1}; Flags: Precursor;; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3).;"
SCNpilot_cont_300_bf_scaffold_1564_curated_2
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1348..2109)
DNA (762bp) protein (254aa)
Proline racemase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J508_9PROT
Proline racemase {ECO:0000313|EMBL:EKE78111.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
uncharacterized LOC585737
SCNpilot_cont_300_bf_scaffold_1564_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2106..3278)
DNA (1173bp) protein (391aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQB8_PARL1
acyl-CoA dehydrogenase domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1564_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3440..4795
DNA (1356bp) protein (452aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TXD0_TISMK
enoyl-CoA hydratase/isomerase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1564_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4841..5503)
DNA (663bp) protein (221aa)
Branched-chain amino acid ABC transporter ATP-binding component (LivF-like) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKJ1_AZOBR
branched-chain amino acid ABC transporter; ATP-binding component (livF-like)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1564_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5500..7032)
DNA (1533bp) protein (511aa)
Putative ABC transporter, permease (N-ter) and ATP-binding (C-ter) components n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKJ0_AZOBR
putative ABC transporter, permease (N-ter) and ATP-binding (C-ter) components
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1564_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7038..7868)
DNA (831bp) protein (277aa)
ABC-type transporter, permease component: HAAT family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TN34_9PROT
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1564_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7907..8497)
DNA (591bp) protein (197aa)
Response regulator receiver domain protein (CheY-like) n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNH8_9PROT
two-component response regulator; K15012 two-component system, response regulator RegA
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1564_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8521..9873)
DNA (1353bp) protein (451aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J9P1_9PROT
regB; two-component sensor histidine kinase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1564_curated_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9878..10675)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YHH2_9GAMM
NUDIX hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1564_curated_11
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10705..11748)
DNA (1044bp) protein (348aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00219};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
dihydroorotase; K01465 dihydroorotase [EC:3.5.2.3]
dihydroorotase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B419EA
SCNpilot_cont_300_bf_scaffold_1564_curated_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11783..12853
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00035E98D5
beta-lactamase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SCNpilot_cont_300_bf_scaffold_1564_curated_13
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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12850..13740
DNA (891bp) protein (297aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A1C7_9PROT
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EHM00380.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_300_bf_scaffold_1564_curated_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13841..14911
DNA (1071bp) protein (357aa)
Secretion protein HlyD n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20XE9_RHOPB
secretion protein HlyD; K01993 HlyD family secretion protein
Secretion protein HlyD {ECO:0000313|EMBL:ABD90187.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_300_bf_scaffold_1564_curated_15
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14908..17661
DNA (2754bp) protein (918aa)
ABC transporter related n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IQ25_XANP2
ABC transporter related; K13926 ribosome-dependent ATPase
ABC transporter related {ECO:0000313|EMBL:ABS70121.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_300_bf_scaffold_1564_curated_16
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17664..18332
DNA (669bp) protein (223aa)
ABC transporter n=1 Tax=Nitratireductor indicus C115 RepID=K2PMB1_9RHIZ
ABC transporter {ECO:0000313|EMBL:EKF42217.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
ABC-2 type transporter; K09686 antibiotic transport system permease protein
Displaying 16 items

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