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SCNpilot_cont_300_bf_scaffold_1178_curated

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1178_curated_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..783)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037A0A12
putative monooxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

892..1770
DNA (879bp) protein (293aa)
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase (2,5-ddol dehydrogenase) id=3892857 bin=GWC2_Methylomirabilis_70_16 species=Burkholderia multivorans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative oxidoreductase
Tax=GWC2_Rokubacteria_70_16_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_3
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1767..2912
DNA (1146bp) protein (382aa)
Putative amino acid aldolase or racemase n=1 Tax=Caulobacter sp. AP07 RepID=J2HCK3_9CAUL
Putative amino acid aldolase or racemase {ECO:0000313|EMBL:EJL33283.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
alanine racemase domain-containing protein
SCNpilot_cont_300_bf_scaffold_1178_curated_4
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2909..4099)
DNA (1191bp) protein (397aa)
Major facilitator superfamily transporter n=1 Tax=Oceanibaculum indicum P24 RepID=K2JPT5_9PROT
Major facilitator superfamily transporter {ECO:0000313|EMBL:EKE77218.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
major facilitator superfamily protein
SCNpilot_cont_300_bf_scaffold_1178_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4099..5223)
DNA (1125bp) protein (375aa)
CoA-transferase (EC:2.8.3.-)
CoA-transferase family III family protein 10 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HNB9_ACHXA
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5321..6523
DNA (1203bp) protein (401aa)
Acetyl-CoA C-acyltransferase n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6E1A6_9BACI
FIG01198985: hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6530..7816
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003725088
phospholipase D/transphosphatidylase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

7862..8581
DNA (720bp) protein (240aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8638..9870
DNA (1233bp) protein (411aa)
Twin-arginine translocation pathway signal n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IUZ9_RHOP2
twin-arginine translocation pathway signal
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:ABD07961.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_300_bf_scaffold_1178_curated_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10017..11213
DNA (1197bp) protein (399aa)
Acyl-CoA dehydrogenase, middle domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4WZD0_9GAMM
acyl-CoA dehydrogenase-like protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11227..12423
DNA (1197bp) protein (399aa)
acyl-CoA dehydrogenase domain-containing protein; K00257 [EC:1.3.99.-]
Acyl-CoA dehydrogenase domain protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T6W1_CAUSK
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12453..13595
DNA (1143bp) protein (381aa)
Acyl-CoA dehydrogenase n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C0F3_HYPNA
acyl-CoA dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13801..14763
DNA (963bp) protein (321aa)
Putative malonate transporter, MdcF, AEC family n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GWW4_9PROT
auxin efflux carrier; K07088
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14785..15297)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036360BE
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_15
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15402..16286)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE32 RepID=R8V7V5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:AID91719.1}; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca KONIH1.;"
MltA-interacting MipA family protein
SCNpilot_cont_300_bf_scaffold_1178_curated_16
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16466..17137
DNA (672bp) protein (224aa)
transcriptional regulator n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037C3AA4
Transcriptional regulator {ECO:0000313|EMBL:KJC35824.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
two-component response regulator
SCNpilot_cont_300_bf_scaffold_1178_curated_17
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17138..18481
DNA (1344bp) protein (448aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002FF777F
two-component hybrid sensor and regulator
SCNpilot_cont_300_bf_scaffold_1178_curated_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18550..19275)
DNA (726bp) protein (242aa)
Putative membrane protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13S12_BURXL
hypothetical protein; K07090
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19301..21952)
DNA (2652bp) protein (884aa)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488F91
methionine synthase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21952..23022)
DNA (1071bp) protein (357aa)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B76C51
methionine synthase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23019..23933)
DNA (915bp) protein (305aa)
metF; 5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20); K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20]
Methylenetetrahydrofolate reductase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IP21_RHOCS
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23930..24910)
DNA (981bp) protein (327aa)
Putative transcriptional regulator (ArsR family) with SAM-dependent methyltransferase domain n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9J3_AZOL4
putative transcriptional regulator (ArsR family) with SAM-dependent methyltransferase domain
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25157..25942
DNA (786bp) protein (262aa)
VacJ family lipoprotein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JS62_9PROT
putative VacJ-like lipoprotein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26021..26611
DNA (591bp) protein (197aa)
Toluene tolerance transporter, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IP24_RHOCS
toluene tolerance transporter putative
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26731..27552
DNA (822bp) protein (274aa)
serine O-acetyltransferase; K00640 serine O-acetyltransferase [EC:2.3.1.30]
Serine O-acetyltransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWE9_PARL1
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27572..28399
DNA (828bp) protein (276aa)
UPI0002971993 related cluster id=1866141 bin=GWA2_Methylomirabilis_73_35 species=Thermus oshimai genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar phosphate isomerase/epimerase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_27
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28516..29232
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. BT03 RepID=J2Q857_9BURK
hypothetical protein
Tax=GWA2_Rhodocyclales_65_20_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29439..31115)
DNA (1677bp) protein (559aa)
Putative ABC transporter, ATP-binding protein with duplicated ATPase domains n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9I9_AZOL4
putative ABC transporter, ATP-binding protein with duplicated ATPase domains
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31232..34678
DNA (3447bp) protein (1149aa)
Sensor histidine kinase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R3D5_9RHIZ
Sensor histidine kinase proline sensor PrlS
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1178_curated_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34696..35298)
DNA (603bp) protein (201aa)
Two-component response regulator, LuxR/FixJ family n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHY4_AZOL4
Two-component response regulator, LuxR/FixJ family
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 36 in total

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