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SCNpilot_cont_300_bf_scaffold_3202_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3202_curated_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75..1214)
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI00031AB7CB
putative hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3202_curated_2
Rhodococcus sp. BCP1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1282..3027
DNA (1746bp) protein (582aa)
Flavin-containing monooxygenase n=1 Tax=Rhodococcus sp. EsD8 RepID=N1M275_9NOCA
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KDE13420.1}; TaxID=931223 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. BCP1.;"
putative oxidoreductase
SCNpilot_cont_300_bf_scaffold_3202_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3072..3533
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00037790BB
CHRD domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3202_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3540..4373)
DNA (834bp) protein (278aa)
amidohydrolase 2 id=4217943 bin=GWC2_Methylomirabilis_70_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase 2
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3202_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4384..5412)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034D1100
putative oxidoreductase, aryl-alcohol dehydrogenase like protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3202_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5497..6150
DNA (654bp) protein (218aa)
putative glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YL79_9RHIZ
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3202_curated_7
unknown

Not on your lists

comp(6155..6655)
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3202_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6664..7548)
DNA (885bp) protein (295aa)
Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate (2,4-D) dioxygenase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZLU7_9BRAD
alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate (2,4-D) dioxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3202_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7587..9623)
DNA (2037bp) protein (679aa)
Short chain dehydrogenase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AFV4_9PROT
short chain dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3202_curated_10
bacterium YEK0313, Bacteria

Not on your lists

comp(9633..10607)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPM2_9RHIZ
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:CEJ14153.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
extra-cytoplasmic solute receptor
SCNpilot_cont_300_bf_scaffold_3202_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10623..11636)
DNA (1014bp) protein (338aa)
alcohol dehydrogenase (EC:1.6.5.5)
Alcohol dehydrogenase, zinc-binding domain protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J9M7_NOSP7
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3202_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11633..12136)
DNA (504bp) protein (168aa)
xanthine-guanine phosphoribosyltransferase; K00769 xanthine phosphoribosyltransferase [EC:2.4.2.22]
Xanthine phosphoribosyltransferase n=1 Tax=Desulfovibrio desulfuricans (strain G20) RepID=XGPT_DESDG
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3202_curated_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12257..12982
DNA (726bp) protein (242aa)
Integral membrane protein, TerC family n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HYA0_RUBGI
TerC family integral membrane protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3202_curated_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12988..13419
DNA (432bp) protein (144aa)
Universal stress protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q318_9RHOO
usp; universal stress protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3202_curated_15
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13513..14700
DNA (1188bp) protein (396aa)
putative deoxyguanosinetriphosphate triphosphohydrolase; K01129 dGTPase [EC:3.1.5.1]
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AFY5_9PROT
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
SCNpilot_cont_300_bf_scaffold_3202_curated_16
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14793..16535
DNA (1743bp) protein (581aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19]
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Arginine--tRNA ligase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISL2_RHOCS
SCNpilot_cont_300_bf_scaffold_3202_curated_17
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16601..17461
DNA (861bp) protein (287aa)
Protein TonB, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISL3_RHOCS
tonB; protein TonB
Protein TonB, putative {ECO:0000313|EMBL:ACI98449.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_cont_300_bf_scaffold_3202_curated_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17535..18557
DNA (1023bp) protein (341aa)
beta-glucosidase-like protein (EC:3.2.1.21); K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52]
Beta-glucosidase-like protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISL4_RHOCS
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3202_curated_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18632..19522
DNA (891bp) protein (297aa)
Segregation and condensation protein A, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISL6_RHOCS
scpA; segregation and condensation protein A; K05896 segregation and condensation protein A
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3202_curated_20
Leishmania panamensis, Leishmania, Kinetoplastida, Eukaryota

Not on your lists

19534..19839
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Entamoeba invadens RepID=S0B3A9_ENTIV
Nucleolar RNA-binding protein, putative {ECO:0000313|EMBL:AIN95790.1}; TaxID=5679 species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania guyanensis species complex.;" source="Leishmania panamensis.;"
nucleolar RNA-binding protein
Displaying 20 items

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