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SCNpilot_cont_300_bf_scaffold_3120_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3120_curated_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2..898
DNA (897bp) protein (299aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Acidovorax sp. CF316 RepID=J1EPV9_9BURK
extracellular ligand-binding receptor
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_300_bf_scaffold_3120_curated_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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929..1801
DNA (873bp) protein (291aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XBR5_9BURK
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_300_bf_scaffold_3120_curated_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1798..2811
DNA (1014bp) protein (338aa)
Amino acid ABC transporter permease protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I7E0_AZOC5
amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_300_bf_scaffold_3120_curated_4
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2969..3844)
DNA (876bp) protein (292aa)
glutathione S-transferase n=1 Tax=Rhizobium leguminosarum RepID=UPI000373451F
Glutathione S-transferase {ECO:0000313|EMBL:EJC63455.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
putative glutathione S-transferase YghU; K11209 GST-like protein
SCNpilot_cont_300_bf_scaffold_3120_curated_5
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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3966..4694
DNA (729bp) protein (243aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z5H8_9BRAD
branched-chain amino acid ABC transporter ATP-binding protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCNpilot_cont_300_bf_scaffold_3120_curated_6
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4687..5388
DNA (702bp) protein (234aa)
ABC transporter ATP-binding protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F0T5_9BURK
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EHK68115.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_3120_curated_7
unknown

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5534..6457
DNA (924bp) protein (308aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3120_curated_8
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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6524..7357
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00035CF289
Contig_23, whole genome shotgun sequence {ECO:0000313|EMBL:KIX13336.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus sp. SPR.;"
transcriptional regulator protein; K13652 AraC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_3120_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7370..8365)
DNA (996bp) protein (332aa)
Putative oligopeptide ABC transporter ATP-binding protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1L3_CALAS
putative oligopeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3120_curated_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8346..9338)
DNA (993bp) protein (331aa)
dppD3; ABC transporter ATPase (EC:3.6.3.23); K02031 peptide/nickel transport system ATP-binding protein
ABC transporter ATPase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S7D1_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3120_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9344..10276)
DNA (933bp) protein (311aa)
ABC-type dipeptide/oligopeptide/nickel transport system, substrate binding protein n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LEI6_RALME
dppA; peptide ABC transporter substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 11 items

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