ggKbase home page

SCNpilot_cont_300_bf_scaffold_3005_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3005_curated_1
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..318
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q2U5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCM78552.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
olsE; ornithine lipid hydroxylase OlsE
SCNpilot_cont_300_bf_scaffold_3005_curated_2
unknown

Not on your lists

comp(334..687)
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3005_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(785..1261)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JT38_AGRVS
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3005_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1246..2532)
DNA (1287bp) protein (429aa)
adenylate/guanylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1]
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000374C53A
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3005_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2597..3658
DNA (1062bp) protein (354aa)
Carboxylesterase Est2 n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0E1W7_9MICO
alpha/beta hydrolase fold-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3005_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3672..4319
DNA (648bp) protein (216aa)
Transcriptional regulator, TetR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F272_CONWI
TetR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3005_curated_7
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4324..5829)
DNA (1506bp) protein (502aa)
Putative transcriptional regulatory protein,GntR family, with a PLP-dependent aminotransferase domain putative signal peptide n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ATZ6_AZOBR
Transcriptional regulator {ECO:0000313|EMBL:AIB15128.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
putative transcriptional regulatory protein,GntR family, with a PLP-dependent aminotransferase domain; putative signal peptide
SCNpilot_cont_300_bf_scaffold_3005_curated_8
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5900..6616
DNA (717bp) protein (239aa)
PREDICTED: uncharacterized protein YIR042C-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1825A
GNAT family acetyltransferase
Acetyltransferase, gnat family {ECO:0000313|EMBL:ADZ69639.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_300_bf_scaffold_3005_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6648..6902)
DNA (255bp) protein (85aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase n=1 Tax=Burkholderia cepacia GG4 RepID=J7J357_BURCE
5-carboxymethyl-2-hydroxymuconate delta-isomerase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 9 items

View Taxonomy