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SCNpilot_cont_300_bf_scaffold_1899_curated

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1899_curated_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114..1349
DNA (1236bp) protein (412aa)
acyl-CoA dehydrogenase domain-containing protein; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7]
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K462_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1355..2101
DNA (747bp) protein (249aa)
Uncharacterized protein n=3 Tax=Azotobacter vinelandii RepID=M9Y7J9_AZOVI
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_3
Brucella sp. 83/13, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2098..2979
DNA (882bp) protein (294aa)
Cytochrome c class I n=2 Tax=Brucella RepID=D1D1R2_9RHIZ
Cytochrome c class I {ECO:0000313|EMBL:EEZ34455.1}; TaxID=520449 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. 83/13.;"
cytochrome c family protein
SCNpilot_cont_300_bf_scaffold_1899_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2976..3986)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RVJ1_9BRAD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3991..5058)
DNA (1068bp) protein (356aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C2B9_NITHN
magnesium and cobalt transporter CorA; K03284 magnesium transporter
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5091..5375)
DNA (285bp) protein (95aa)
Antibiotic biosynthesis monooxygenase id=3424847 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
antibiotic biosynthesis monooxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5393..5884)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S723_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5909..6595)
DNA (687bp) protein (229aa)
Glutathione S-transferase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2W2T7_9BRAD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6592..7287)
DNA (696bp) protein (232aa)
Glutathione S-transferase domain n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VQJ7_RHOPX
glutathione S-transferase domain-containing protein
Glutathione S-transferase domain {ECO:0000313|EMBL:ADU46105.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_cont_300_bf_scaffold_1899_curated_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7277..8158)
DNA (882bp) protein (294aa)
3-hydroxyisobutyrate dehydrogenase; K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2M8I9_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8202..9302)
DNA (1101bp) protein (367aa)
enoyl-CoA hydratase; K01692 enoyl-CoA hydratase [EC:4.2.1.17]
Enoyl-CoA hydratase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMT6_RHOCS
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9366..10436)
DNA (1071bp) protein (357aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TKC3_TISMK
acyl-CoA dehydrogenase domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_13
unknown

Not on your lists

10598..11035
DNA (438bp) protein (146aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1899_curated_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11055..12065
DNA (1011bp) protein (337aa)
hemB; Delta-aminolevulinic acid dehydratase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24]
Delta-aminolevulinic acid dehydratase n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SKZ1_RHOPH
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12075..12563
DNA (489bp) protein (163aa)
NUDIX hydrolase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQU4_PARL1
NUDIX hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_16
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12578..13411)
DNA (834bp) protein (278aa)
2-methylisocitrate lyase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000366ED35
carboxyvinyl-carboxyphosphonate phosphorylmutase
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13517..14434
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PR48_9ACTO
LysR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14456..14599)
DNA (144bp) protein (48aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14586..15584)
DNA (999bp) protein (333aa)
DNA polymerase III subunit alpha n=1 Tax=alpha proteobacterium BAL199 RepID=A8TUN0_9PROT
hypothetical protein; K07019
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15581..16441)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMU3_RHOCS
hypothetical protein; K07019
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16792..17496
DNA (705bp) protein (235aa)
Putative uncharacterized protein id=3959920 bin=GWF2_Methylomirabilis_70_14 species=Mesorhizobium alhagi genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17506..18663
DNA (1158bp) protein (386aa)
L-carnitine dehydratase/bile acid-inducible protein F (EC:2.8.3.16)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=alpha proteobacterium BAL199 RepID=A8TKJ8_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_23
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18668..21103
DNA (2436bp) protein (812aa)
Penicillin acylase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ANM2_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:KJB90709.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
penicillin acylase
SCNpilot_cont_300_bf_scaffold_1899_curated_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21325..22641)
DNA (1317bp) protein (439aa)
UPI0003CEB033 related cluster n=1 Tax=unknown RepID=UPI0003CEB033
Hemolysin {ECO:0000313|EMBL:KFC75957.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hemolysin protein
SCNpilot_cont_300_bf_scaffold_1899_curated_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22666..23502)
DNA (837bp) protein (279aa)
taurine dioxygenase; K03119 taurine dioxygenase [EC:1.14.11.17]
alpha-ketoglutarate-dependent taurine dioxygenase n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000289ABE4
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23514..24317)
DNA (804bp) protein (268aa)
putative enoyl-CoA hydratase (EC:4.2.1.17)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000369079E
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24358..25203
DNA (846bp) protein (282aa)
mepA; penicillin-insensitive murein endopeptidase; K07261 penicillin-insensitive murein endopeptidase [EC:3.4.24.-]
Peptidoglycan amidase MepA n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZXA6_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_28
unknown

Not on your lists

comp(25466..25840)
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1899_curated_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25866..26663)
DNA (798bp) protein (266aa)
ABC-type multidrug transport system, permease component n=1 Tax=Oceanibaculum indicum P24 RepID=K2K223_9PROT
hypothetical protein; K09686 antibiotic transport system permease protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1899_curated_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26660..27433)
DNA (774bp) protein (258aa)
ABC transporter, ATP-binding component n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2YEY1_9PROT
ABC transporter, ATP-binding component
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 43 in total

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