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SCNpilot_cont_300_bf_scaffold_1595_curated

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1595_curated_1
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1780)
DNA (1779bp) protein (593aa)
3-oxoacyl-[acyl-carrier-protein] synthase II n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HNE3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC53818.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
adenylate cyclase rbh
SCNpilot_cont_300_bf_scaffold_1595_curated_2
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1900..2700)
DNA (801bp) protein (267aa)
Transcriptional regulator, IclR family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IVY0_METNO
Transcriptional regulator IclR {ECO:0000313|EMBL:GAN75913.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
IclR family transcriptional regulator; K02624 IclR family transcriptional regulator, pca regulon regulatory protein
SCNpilot_cont_300_bf_scaffold_1595_curated_3
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2841..4172
DNA (1332bp) protein (444aa)
Putative dioxygenase phtalate dioxygenase oxygenase subunit n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SG06_9BRAD
putative dioxygenase
Putative dioxygenase {ECO:0000313|EMBL:BAM86812.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_cont_300_bf_scaffold_1595_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4178..5608
DNA (1431bp) protein (477aa)
glutamine synthetase catalytic region; K01915 glutamine synthetase [EC:6.3.1.2]
Glutamine synthetase catalytic region n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IVY4_METNO
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1595_curated_5
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5638..5937
DNA (300bp) protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:ETR78914.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCNpilot_cont_300_bf_scaffold_1595_curated_6
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6149..6442
DNA (294bp) protein (98aa)
Acyl carrier protein n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9SAS6_9RHOB
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium thermophilum DSM 16684.;"
acpP; acyl carrier protein; K02078 acyl carrier protein
SCNpilot_cont_300_bf_scaffold_1595_curated_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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6510..7472
DNA (963bp) protein (321aa)
ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000369321A
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCNpilot_cont_300_bf_scaffold_1595_curated_8
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7469..9034)
DNA (1566bp) protein (522aa)
EmrB/QacA subfamily drug resistance transporter n=1 Tax=Rhizobium sp. CCGE 510 RepID=J4TET8_9RHIZ
EmrB/QacA subfamily drug resistance transporter {ECO:0000313|EMBL:EJT07007.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
EmrB/QacA subfamily drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
SCNpilot_cont_300_bf_scaffold_1595_curated_9
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9050..10210)
DNA (1161bp) protein (387aa)
hemolysin secretion protein D n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037A2211
Multidrug resistance efflux pump {ECO:0000313|EMBL:BAR55509.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
secretion protein; K03543 multidrug resistance protein A rbh
SCNpilot_cont_300_bf_scaffold_1595_curated_10
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10351..11280
DNA (930bp) protein (310aa)
Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8II59_METNO
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACL57928.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_300_bf_scaffold_1595_curated_11
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11328..12377
DNA (1050bp) protein (350aa)
serine protease n=1 Tax=Methyloferula stellata RepID=UPI0003719E38
Serine protease {ECO:0000313|EMBL:KFG69291.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1595_curated_12
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

12374..12688
DNA (315bp) protein (105aa)
CutA1 divalent ion tolerance protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V252_ROSS1
CutA1 divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein
CutA1 divalent ion tolerance protein {ECO:0000313|EMBL:ABQ92955.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
SCNpilot_cont_300_bf_scaffold_1595_curated_13
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12773..13966)
DNA (1194bp) protein (398aa)
ABC transporter permease n=1 Tax=Bradyrhizobium japonicum RepID=UPI000372E71D
substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein rbh
Substrate-binding protein {ECO:0000313|EMBL:BAR55258.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
SCNpilot_cont_300_bf_scaffold_1595_curated_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14069..14548)
DNA (480bp) protein (160aa)
glyoxalase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039B6F64
glyxoylase; K04750 PhnB protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1595_curated_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14594..15187
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family n=1 Tax=uncultured bacterium RepID=K2BLZ9_9BACT
Transcriptional regulator,TetR family
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1595_curated_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15168..16241)
DNA (1074bp) protein (358aa)
2-nitropropane dioxygenase npd; K00459 nitronate monooxygenase [EC:1.13.12.16]
2-nitropropane dioxygenase NPD n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08WD3_STIAD
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1595_curated_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16338..17255
DNA (918bp) protein (306aa)
Transcriptional regulator id=4341262 bin=GWF2_Methylomirabilis_70_14 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1595_curated_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17252..17614
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D6W0_BRAJP
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1595_curated_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17628..19034
DNA (1407bp) protein (469aa)
amidase (EC:3.5.1.-)
Amidase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JTW1_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1595_curated_20
unknown

Not on your lists

comp(19024..19245)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1595_curated_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19385..20314
DNA (930bp) protein (310aa)
3-hydroxyisobutyrate dehydrogenase; K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
Putative 3-hydroxyisobutyrate dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGW9_9BURK
Putative 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:EIK88459.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
SCNpilot_cont_300_bf_scaffold_1595_curated_22
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20317..21708
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GAT7_9BRAD
Cytosine deaminase {ECO:0000313|EMBL:KJC37224.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1595_curated_23
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21722..22312
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036D66D7
hypothetical protein
Tax=GWA2_Curvibacter_64_110_curated
Displaying 23 items

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