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SCNpilot_cont_300_bf_scaffold_2571_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2571_curated_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1793)
DNA (1791bp) protein (597aa)
Carbon monoxide dehydrogenase large chain n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TJS6_TISMK
cutL; carbon monoxide dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2571_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1829..2812)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023782B6
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2571_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2809..3981)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Rhodococcus RepID=UPI00037A80D3
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2571_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3992..4777)
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EFP6_9SPHN
bphR1; HTH-type transcriptional regulator BphR
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2571_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4788..5495)
DNA (708bp) protein (236aa)
ABC-type branched-chain amino acid transport system, ATPase component id=3434010 bin=GWF2_Methylomirabilis_70_14 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2571_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5485..7248)
DNA (1764bp) protein (588aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J3CQK7_9BURK
branched-chain amino acid ABC transporter permease; K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chain amino acid transport system permease protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2571_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7245..8096)
DNA (852bp) protein (284aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Variovorax sp. CF313 RepID=J2K7N5_9BURK
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2571_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8127..9344)
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030E032F
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2571_curated_9
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9457..10164)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002FB55BA
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFI29931.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;"
putative branched-chain amino acid ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_2571_curated_10
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10157..10909)
DNA (753bp) protein (251aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9NMD0_RHILT
Hemolysin III {ECO:0000313|EMBL:KFG67039.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
branched-chain amino acid ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_2571_curated_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10906..11868)
DNA (963bp) protein (321aa)
ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI0002375555
Inner-membrane translocator {ECO:0000313|EMBL:KFC71635.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
inner-membrane translocator
SCNpilot_cont_300_bf_scaffold_2571_curated_12
bacterium YEK0313, Bacteria

Not on your lists

comp(11865..12719)
DNA (855bp) protein (285aa)
High-affinity branched-chain amino acid transport system permease protein LivH n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4TGP4_9RHIZ
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:CEJ10469.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
urea or short-chain amide ABC transporter; K01997 branched-chain amino acid transport system permease protein
Displaying 12 items

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