name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_655_curated_31
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32549..33388)
----------------- DNA (840bp) protein (280aa) |
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035F4987
amidohydrolase 2; K07046
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_32
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33502..33966
----------------- DNA (465bp) protein (155aa) |
tRNA proofreading protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UDU4_9RHOB
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_33
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33971..34945)
----------------- DNA (975bp) protein (325aa) |
Putative oxidoreductase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZI6_ANATU
putative oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_34
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34942..36174)
----------------- DNA (1233bp) protein (411aa) |
Putative uncharacterized protein n=1 Tax=uncultured alpha proteobacterium EBAC2C11 RepID=Q5UEX1_9PROT
putative Permease of the major facilitator superfamily
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_35
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
36178..37842
----------------- DNA (1665bp) protein (555aa) |
Choline dehydrogenase, a flavoprotein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VWQ9_9SPHN
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_36
Pseudomonas sp. 5, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(37859..38614)
----------------- DNA (756bp) protein (252aa) |
Class II Aldolase/Adducin Family Protein n=1 Tax=Pseudomonas sp. UW4 RepID=K9NGT4_9PSED
Aldolase {ECO:0000313|EMBL:KJK05884.1}; TaxID=1619949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 5.;"
Class II Aldolase/Adducin Family Protein
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_37
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(38629..39603)
----------------- DNA (975bp) protein (325aa) |
Twin-arginine translocation pathway signal n=2 Tax=Alicycliphilus denitrificans RepID=E8TUP2_ALIDB
twin-arginine translocation pathway signal protein
Twin-arginine translocation pathway signal protein {ECO:0000313|EMBL:GAO26021.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_38
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(39656..40633)
----------------- DNA (978bp) protein (326aa) |
Uncharacterized protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UM28_ALCFA
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGP01636.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
extra-cytoplasmic solute receptor
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_39
unknown
|
Not on your lists |
comp(40807..41007)
----------------- DNA (201bp) protein (67aa) |
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_655_curated_40
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(41027..41989)
----------------- DNA (963bp) protein (321aa) |
Peptide chain release factor 2 (RF-2) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F0I9_9PROT
prfB; translation peptide chain release factor 2; K02836 peptide chain release factor 2
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_41
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(42225..44684)
----------------- DNA (2460bp) protein (820aa) |
penicillin-binding protein 1A (EC:2.4.1.129); K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-]
Penicillin-binding protein 1A n=2 Tax=Rhodospirillum rubrum RepID=G2TD49_RHORU
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_42
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(44743..45612)
----------------- DNA (870bp) protein (290aa) |
amiB; N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INB4_RHOCS
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_43
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
46107..49121
----------------- DNA (3015bp) protein (1005aa) |
ribonuclease, Rne/Rng family; K08300 ribonuclease E [EC:3.1.26.12]
Ribonuclease E n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZS7_9RHIZ
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_44
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
49200..50165
----------------- DNA (966bp) protein (322aa) |
ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2G3N3_9BURK
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESH87848.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
extra-cytoplasmic solute receptor family protein 68
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_45
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
50336..53587
----------------- DNA (3252bp) protein (1084aa) |
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI000370A947
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:GAM98113.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
putative sensor histidine kinase with a response regulator receiver domain
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_46
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
53639..53920
----------------- DNA (282bp) protein (94aa) |
Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D2Q5_BRAJP
transcriptional regulator
Transcriptional regulatory protein {ECO:0000313|EMBL:BAL11916.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_47
unknown
|
Not on your lists |
comp(53934..54347)
----------------- DNA (414bp) protein (138aa) |
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_655_curated_48
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
54437..55867
----------------- DNA (1431bp) protein (477aa) |
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
Aldehyde dehydrogenase family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A2N2_9PROT
Aldehyde dehydrogenase family protein {ECO:0000313|EMBL:EHL99616.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_49
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(55903..57072)
----------------- DNA (1170bp) protein (390aa) |
mannose-6-phosphate isomerase n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI0003615404
N-acyl-D-glucosamine 2-epimerase {ECO:0000313|EMBL:EJL25385.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_50
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(57238..58734)
----------------- DNA (1497bp) protein (499aa) |
betaine-aldehyde dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002D54218
Bradyrhizobium elkanii strain UASWS1015 Contig174, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49290.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
putative betaine aldehyde dehydrogenase
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_51
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(58748..60244)
----------------- DNA (1497bp) protein (499aa) |
aldehyde dehydrogenase (acceptor); K00146 phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
UPI0003D1C0CA related cluster n=1 Tax=unknown RepID=UPI0003D1C0CA
Contig28, whole genome shotgun sequence {ECO:0000313|EMBL:ETA50624.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_52
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
60407..60805
----------------- DNA (399bp) protein (133aa) |
Transcriptional regulator ModE n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IPA1_RHOCS
modE; transcriptional regulator ModE; K02019 molybdate transport system regulatory protein
Transcriptional regulator ModE {ECO:0000313|EMBL:ACI99603.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_53
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
60899..61279
----------------- DNA (381bp) protein (127aa) |
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003623722
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM90136.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_54
unknown
|
Not on your lists |
61290..61688
----------------- DNA (399bp) protein (133aa) |
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_655_curated_55
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(61672..62463)
----------------- DNA (792bp) protein (264aa) |
Molybdenum ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVD5_9RHIZ
Molybdenum ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:EIM27927.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
modA; molybdenum ABC transporter, periplasmic molybdate-binding protein; K02020 molybdate transport system substrate-binding protein
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_56
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
62634..62840
----------------- DNA (207bp) protein (69aa) |
hypothetical protein n=1 Tax=Rhizobium gallicum RepID=UPI000376C663
Transporter {ECO:0000313|EMBL:KDP72940.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
molybdo-pterin binding protein
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_57
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
62850..63347
----------------- DNA (498bp) protein (166aa) |
virR n=1 Tax=Hoeflea sp. 108 RepID=UPI00037B7F07
VirR {ECO:0000313|EMBL:ETR78213.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_58
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
63344..64378
----------------- DNA (1035bp) protein (345aa) |
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003788975
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM32606.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
ABC transporter substrate-binding protein; K02016 iron complex transport system substrate-binding protein
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_59
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
64386..65387
----------------- DNA (1002bp) protein (334aa) |
ABC transporter permease protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JBX3_OLICO
ABC transporter permease; K02015 iron complex transport system permease protein
ABC transporter permease protein {ECO:0000313|EMBL:AEI07597.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_cont_300_bf_scaffold_655_curated_60
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
65393..66160
----------------- DNA (768bp) protein (256aa) |
ABC transporter ATP-binding protein; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NWN8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33596.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
|