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SCNpilot_cont_300_bf_scaffold_1356_curated

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1356_curated_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..233)
DNA (231bp) protein (77aa)
hmuV; hemin importer ATP-binding subunit; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
ABC-type hemin transport system, ATPase component n=1 Tax=Pseudomonas sp. GM25 RepID=J2X3P9_9PSED
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1356_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(230..1279)
DNA (1050bp) protein (350aa)
Transport system permease protein n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RTW3_ALLVD
transport system permease; K02015 iron complex transport system permease protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1356_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1276..2139)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI0003676795
periplasmic-binding protein; K02016 iron complex transport system substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1356_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2139..3188)
DNA (1050bp) protein (350aa)
Hemin transport protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IY27_RHOCS
hmuS; hemin transport protein; K07225 putative hemin transport protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1356_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3200..4078)
DNA (879bp) protein (293aa)
TonB family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPH4_PARL1
TonB family protein; K03832 periplasmic protein TonB
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1356_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4072..6348)
DNA (2277bp) protein (759aa)
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein (Fragment) n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJF8_9PROT
TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; K02014 iron complex outermembrane recepter protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1356_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6455..6697)
DNA (243bp) protein (81aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1356_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6741..7238
DNA (498bp) protein (166aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1356_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7235..7510
DNA (276bp) protein (92aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1356_curated_10
Photobacterium sp. AK15, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7507..8706
DNA (1200bp) protein (400aa)
Multidrug-efflux transporter n=1 Tax=Photobacterium sp. AK15 RepID=L8JH86_9GAMM
Multidrug-efflux transporter {ECO:0000313|EMBL:ELR66777.1}; TaxID=1056511 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium sp. AK15.;"
major facilitator transporter
SCNpilot_cont_300_bf_scaffold_1356_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8703..9056
DNA (354bp) protein (118aa)
glyoxalase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D93FF
putative bleomycin resistance protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1356_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9061..10956)
DNA (1896bp) protein (632aa)
Probable potassium transport system protein kup n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1BRH5_9NEIS
potassium uptake protein; K03549 KUP system potassium uptake protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1356_curated_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11091..11483
DNA (393bp) protein (131aa)
carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] id=14625236 bin=bin7_NC10_sister species=Advenella kashmirensis genus=Advenella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
carboxymuconolactone decarboxylase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1356_curated_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11488..12405
DNA (918bp) protein (306aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13EU9_RHOPS
SCNpilot_cont_300_bf_scaffold_1356_curated_15
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12402..13232
DNA (831bp) protein (277aa)
methyltransferase type 12 n=1 Tax=Agromyces italicus RepID=UPI0003B45C3E
Uncharacterized protein {ECO:0000313|EMBL:EDP66315.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
methyltransferase type 11
SCNpilot_cont_300_bf_scaffold_1356_curated_16
unknown

Not on your lists

comp(13339..13596)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1356_curated_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13770..14678)
DNA (909bp) protein (303aa)
Membrane protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2J0L1_9BURK
integral membrane protein, terc family
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1356_curated_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14791..15138)
DNA (348bp) protein (116aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1356_curated_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15252..17516)
DNA (2265bp) protein (755aa)
actP; copper-transporting P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-transporting P-type ATPase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EUA0_BRASB
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1356_curated_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17553..17918
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HVA4_AZOC5
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1356_curated_21
unknown

Not on your lists

17990..18487
DNA (498bp) protein (166aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1356_curated_22
unknown

Not on your lists

18663..18911
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1356_curated_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18908..20344
DNA (1437bp) protein (479aa)
Outer membrane efflux protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IQ15_XANP2
outer membrane efflux protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1356_curated_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20359..21780
DNA (1422bp) protein (474aa)
copper oxidase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031F9DAE
multicopper oxidase type 3
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1356_curated_25
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21802..22275
DNA (474bp) protein (158aa)
Blue (Type 1) copper domain protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IXR5_METNO
blue (type 1) copper domain-containing protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ACL62897.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_300_bf_scaffold_1356_curated_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22287..22592
DNA (306bp) protein (102aa)
Dihydroxy-acid dehydratase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HCJ4_9BRAD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1356_curated_27
unknown

Not on your lists

22589..22894
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1356_curated_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22895..23359
DNA (465bp) protein (155aa)
Cytochrome n=1 Tax=Oceanibaculum indicum P24 RepID=K2J5E8_9PROT
cytochrome c class I
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1356_curated_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23499..24905
DNA (1407bp) protein (469aa)
NfeD family protein n=1 Tax=Burkholderia sp. KJ006 RepID=I2DRN7_9BURK
NfeD family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1356_curated_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24902..25663
DNA (762bp) protein (254aa)
membrane protein n=1 Tax=Pseudomonas thermotolerans RepID=UPI000381E7BB
stomatin-like protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 33 in total

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