ggKbase home page

SCNpilot_cont_300_bf_scaffold_1680_curated

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1680_curated_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129..1013)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Nocardiopsis halophila RepID=UPI000345A071
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1680_curated_2
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1140..2831
DNA (1692bp) protein (564aa)
AMP-dependent synthetase and ligase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TKX5_TISMK
Fatty-acid--CoA ligase/acetyl-coenzyme A synthetase {ECO:0000313|EMBL:GAN78300.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
AMP-dependent synthetase and ligase
SCNpilot_cont_300_bf_scaffold_1680_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3077..4024
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1WYM2_BACMS
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1680_curated_4
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4025..5893)
DNA (1869bp) protein (623aa)
CLC-type chloride channel protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZC12_AZOL4
Chloride channel protein {ECO:0000313|EMBL:KJB95269.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
CLC-type chloride channel protein; K03281 chloride channel protein, CIC family
SCNpilot_cont_300_bf_scaffold_1680_curated_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5994..6599
DNA (606bp) protein (202aa)
glutamine amidotransferase of anthranilate synthase; K01658 anthranilate synthase component II [EC:4.1.3.27]
Glutamine amidotransferase of anthranilate synthase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXZ4_PARL1
Glutamine amidotransferase of anthranilate synthase {ECO:0000313|EMBL:ABS64777.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_300_bf_scaffold_1680_curated_6
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6643..7716
DNA (1074bp) protein (358aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
Histidinol-phosphate aminotransferase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EJJ4_9RHIZ
histidinol-phosphate aminotransferase
SCNpilot_cont_300_bf_scaffold_1680_curated_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7832..8794
DNA (963bp) protein (321aa)
MFS transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036FB2F4
Uncharacterized protein {ECO:0000313|EMBL:GAD23687.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1680_curated_8
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9055..10599)
DNA (1545bp) protein (515aa)
EmrB/QacA subfamily drug resistance transporter n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LTJ4_9PROT
EmrB/QacA subfamily drug resistance transporter {ECO:0000313|EMBL:EKF08267.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
EmrB/QacA family drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
SCNpilot_cont_300_bf_scaffold_1680_curated_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10613..11791)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037E99CA
multidrug resistance efflux pump
Secretion protein HlyD family protein {ECO:0000313|EMBL:CDX34285.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_cont_300_bf_scaffold_1680_curated_10
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11784..12263)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036A09C6
MarR family transcriptional regulator {ECO:0000313|EMBL:EPE97344.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
MarR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1680_curated_11
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12630..13655
DNA (1026bp) protein (342aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18); K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18] rbh
Anthranilate phosphoribosyltransferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TUH3_9PROT
SCNpilot_cont_300_bf_scaffold_1680_curated_12
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13652..14464
DNA (813bp) protein (271aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
trpC; indole-3-glycerol-phosphate synthase; K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48]
Indole-3-glycerol phosphate synthase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AL05_AZOBR
SCNpilot_cont_300_bf_scaffold_1680_curated_13
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14461..15012
DNA (552bp) protein (184aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2IXU0_9PROT
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
moaC; molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C
SCNpilot_cont_300_bf_scaffold_1680_curated_14
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14996..16210
DNA (1215bp) protein (405aa)
moeA; molybdopterin biosynthesis protein MoeA; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]
MoeA-like protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JLI3_9PROT
MoeA-like protein {ECO:0000313|EMBL:EKE75272.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCNpilot_cont_300_bf_scaffold_1680_curated_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16339..17088
DNA (750bp) protein (250aa)
lexA; LexA repressor (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88]
LexA repressor n=1 Tax=Oceanibaculum indicum P24 RepID=K2JJ41_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1680_curated_16
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

17353..17655
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UAC9_MYXSD
hypothetical protein
Tax=RBG_13_Ignavibacteria_36_8_curated
SCNpilot_cont_300_bf_scaffold_1680_curated_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17636..18664)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EE3C76
Transcriptional regulator, AraC family {ECO:0000313|EMBL:KFC65812.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
AraC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1680_curated_18
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18755..20365)
DNA (1611bp) protein (537aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UB91_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV18709.1}; Flags: Precursor;; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
hypothetical protein
Displaying 18 items

View Taxonomy