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SCNpilot_cont_300_bf_scaffold_2087_curated

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2087_curated_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..269
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037057EF
Strain MEJ076 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ03458.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
GAF sensor protein
SCNpilot_cont_300_bf_scaffold_2087_curated_2
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

281..2050
DNA (1770bp) protein (590aa)
oligoendopeptidase, pe PF (EC:3.4.24.-); K08602 oligoendopeptidase F [EC:3.4.24.-]
Peptidase M3B, oligoendopeptidase F n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TW58_9PROT
Peptidase M3B, oligoendopeptidase F {ECO:0000313|EMBL:CAM74865.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
SCNpilot_cont_300_bf_scaffold_2087_curated_3
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2087..3421
DNA (1335bp) protein (445aa)
Abc1 protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJC2_9PROT
Abc1 protein {ECO:0000313|EMBL:EDP66727.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
aarF domain-containing kinase
SCNpilot_cont_300_bf_scaffold_2087_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3418..4344
DNA (927bp) protein (309aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKF2_SINAD
nucleoside-diphosphate-sugar epimerase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2087_curated_5
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4341..4715)
DNA (375bp) protein (125aa)
SnoaL-like polyketide cyclase family protein 3 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HUU4_ACHXA
Uncharacterized protein {ECO:0000313|EMBL:KFG67605.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
snoaL-like polyketide cyclase family protein 3
SCNpilot_cont_300_bf_scaffold_2087_curated_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4819..5538
DNA (720bp) protein (240aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodobacter sp. SW2 RepID=C8S3F9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:CDX39860.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Crp-type transcriptional activatory protein (fragment)
SCNpilot_cont_300_bf_scaffold_2087_curated_7
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5639..5881
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DA41_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:KJC48655.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2087_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5881..6654
DNA (774bp) protein (258aa)
membrane protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0002F0997A
terC; membrane protein TerC
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2087_curated_9
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6693..7748)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BVB4_9GAMM
SAM-dependent methyltransferase {ECO:0000313|EMBL:KJC60196.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
Methyltransferase type 12
SCNpilot_cont_300_bf_scaffold_2087_curated_10
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8308..9126
DNA (819bp) protein (273aa)
Transcriptional regulator, Crp n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IXV7_RHOCS
transcriptional regulator, Crp
Transcriptional regulator, Crp {ECO:0000313|EMBL:ACJ01131.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_cont_300_bf_scaffold_2087_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9104..10726)
DNA (1623bp) protein (541aa)
hypothetical protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000376BA02
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2087_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10775..11383
DNA (609bp) protein (203aa)
Protein SanA n=1 Tax=Capnocytophaga sp. oral taxon 329 str. F0087 RepID=F3Y4P9_9FLAO
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2087_curated_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11409..13373)
DNA (1965bp) protein (655aa)
putative serine/threonine kinase (EC:2.7.1.-); K00924 [EC:2.7.1.-]
Putative serine/threonine kinase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KCE8_AZOSB
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2087_curated_14
bacterium YEK0313, Bacteria

Not on your lists

comp(13465..14301)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI0003622C00
EamA-like transporter family protein {ECO:0000313|EMBL:CEJ13927.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2087_curated_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14337..14906)
DNA (570bp) protein (190aa)
Putative transcriptional regulator n=1 Tax=Polaromonas sp. CF318 RepID=J2TK15_9BURK
XRE family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2087_curated_16
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14958..15656)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Sagittula stellata E-37 RepID=A3K000_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EBA09115.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E-37.;"
SCNpilot_cont_300_bf_scaffold_2087_curated_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15776..16549)
DNA (774bp) protein (258aa)
Transcriptional regulatory protein chvI n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4A7_9PROT
putative two-component response regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2087_curated_18
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16611..17405)
DNA (795bp) protein (265aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NP39_GRAMM
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEU38238.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
SCNpilot_cont_300_bf_scaffold_2087_curated_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17577..19358
DNA (1782bp) protein (594aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034653B6
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2087_curated_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19377..24239
DNA (4863bp) protein (1621aa)
Cytochrome P450-like n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13CI2_RHOPS
cytochrome P450-like protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2087_curated_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24316..24699
DNA (384bp) protein (128aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2087_curated_22
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24731..25606)
DNA (876bp) protein (292aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia felis ATCC 53690 RepID=K8NS80_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:KGM31487.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
HlyD family protein
SCNpilot_cont_300_bf_scaffold_2087_curated_23
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25621..25818)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1A0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KGM31486.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2087_curated_24
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25815..27878)
DNA (2064bp) protein (688aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJ59_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:KGM31013.1}; Flags: Fragment;; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
putative transmembrane protein
SCNpilot_cont_300_bf_scaffold_2087_curated_25
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28092..28496
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T159_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE00186.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2087_curated_26
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28493..29575
DNA (1083bp) protein (361aa)
poly-beta-hydroxybutyrate polymerase (EC:2.3.1.-); K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-] rbh
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T160_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE00187.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
Displaying 26 items

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