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SCNpilot_cont_300_bf_scaffold_2027_curated

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2027_curated_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..192
DNA (192bp) protein (64aa)
Putative Formyl-coenzyme A transferase (Formyl-CoA transferase ) n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TTK5_9BRAD
Carnitine dehydratase {ECO:0000313|EMBL:KIZ40394.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
putative formyl-coenzyme A transferase
SCNpilot_cont_300_bf_scaffold_2027_curated_2

Not on your lists

206..1114
DNA (909bp) protein (303aa)
acetyl-hydrolase (EC:3.1.1.-); K01066 esterase / lipase [EC:3.1.1.-]
Lipolytic enzyme n=1 Tax=uncultured bacterium RepID=B8Y561_9BACT
Lipolytic enzyme {ECO:0000313|EMBL:ACL67845.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_300_bf_scaffold_2027_curated_3
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1302..2075)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HA60_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF86712.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
kdgR; transcriptional regulator, IclR family
SCNpilot_cont_300_bf_scaffold_2027_curated_4
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2188..3045)
DNA (858bp) protein (286aa)
Transcriptional regulator, IclR family n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RLE1_MOOTA
IclR family transcriptional regulator; K13641 IclR family transcriptional regulator, acetate operon repressor
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ABC18748.1}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
SCNpilot_cont_300_bf_scaffold_2027_curated_5
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3382..5235
DNA (1854bp) protein (618aa)
Cyclododecanone monooxygenase n=1 Tax=Rhodococcus sp. JVH1 RepID=J2J7T1_9NOCA
Cyclododecanone monooxygenase {ECO:0000313|EMBL:EJI95634.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
Baeyer-Villiger monooxygenase
SCNpilot_cont_300_bf_scaffold_2027_curated_6
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5367..6341
DNA (975bp) protein (325aa)
Extra-cytoplasmic solute receptor protein n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LBX3_RALME
bug; ABC transporter substrate-binding protein
Extra-cytoplasmic solute receptor protein {ECO:0000313|EMBL:ABF12353.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
SCNpilot_cont_300_bf_scaffold_2027_curated_7
unknown

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comp(6375..6608)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2027_curated_8
unknown

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6851..7564
DNA (714bp) protein (238aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2027_curated_9
unknown

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7575..7955
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2027_curated_10
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8016..8312)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00030D4B50
Uncharacterized protein {ECO:0000313|EMBL:CCE12017.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2027_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8445..8774)
DNA (330bp) protein (110aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2027_curated_12
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8771..9112)
DNA (342bp) protein (114aa)
Bll2637 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89RX5_BRADU
hypothetical protein; K09137 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ68123.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCNpilot_cont_300_bf_scaffold_2027_curated_13
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9114..9578)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E3EB75
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
crcB protein; K06199 CrcB protein
SCNpilot_cont_300_bf_scaffold_2027_curated_14
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9575..9988)
DNA (414bp) protein (138aa)
Putative fluoride ion transporter CrcB n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HFH0_9SPHN
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
camphor resistance protein CrcB; K06199 CrcB protein
SCNpilot_cont_300_bf_scaffold_2027_curated_15
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10006..11220)
DNA (1215bp) protein (405aa)
Glutathione-regulated potassium-proton antiporter n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HMZ9_PSEUO
Potassium transporter Kef {ECO:0000313|EMBL:KES22373.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. AAC.;"
sodium/hydrogen exchanger
SCNpilot_cont_300_bf_scaffold_2027_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11416..12378)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQI1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91471.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2027_curated_17
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12513..13475)
DNA (963bp) protein (321aa)
Extra-cytoplasmic solute receptor protein n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LBX3_RALME
bug; ABC transporter substrate-binding protein
Extra-cytoplasmic solute receptor protein {ECO:0000313|EMBL:ABF12353.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
SCNpilot_cont_300_bf_scaffold_2027_curated_18
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13593..15446)
DNA (1854bp) protein (618aa)
Cyclododecanone monooxygenase n=1 Tax=Rhodococcus sp. JVH1 RepID=J2J7T1_9NOCA
Cyclododecanone monooxygenase {ECO:0000313|EMBL:EJI95634.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
monooxygenase
SCNpilot_cont_300_bf_scaffold_2027_curated_19
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15903..16868)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Paenibacillus alvei TS-15 RepID=S9SI34_PAEAL
Uncharacterized protein {ECO:0000313|EMBL:EPY03768.1}; TaxID=1117108 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus alvei TS-15.;"
peptidoglycan-binding domain-containing protein
SCNpilot_cont_300_bf_scaffold_2027_curated_20
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16966..19290)
DNA (2325bp) protein (775aa)
aldehyde oxidase/xanthine dehydrogenase; K07303 isoquinoline 1-oxidoreductase, beta subunit [EC:1.3.99.16]
Putative aldehyde dehydrogenase n=1 Tax=Thauera sp. 63 RepID=N6XHH8_9RHOO
Putative aldehyde dehydrogenase {ECO:0000313|EMBL:ENO78835.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
SCNpilot_cont_300_bf_scaffold_2027_curated_21
unknown

Not on your lists

comp(19293..19745)
DNA (453bp) protein (151aa)
Isoquinoline 1-oxidoreductase subunit alpha {ECO:0000313|EMBL:CPR18425.1}; EC=1.3.99.16 {ECO:0000313|EMBL:CPR18425.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
(2Fe-2S)-binding domain-containing protein; K07302 isoquinoline 1-oxidoreductase, alpha subunit [EC:1.3.99.16]
(2Fe-2S)-binding domain protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IEN1_METNO
Displaying 21 items

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