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SCNpilot_cont_300_bf_scaffold_2377_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2377_curated_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..744
DNA (744bp) protein (248aa)
Mandelate racemase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXZ9_9EURY
mandelate racemase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2377_curated_2
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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816..2084
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DJZ1_BRAJP
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGT76446.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
hypothetical protein; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_2377_curated_3
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2128..2991
DNA (864bp) protein (288aa)
Amino acid ABC transporter permease protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G9V0_9BRAD
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KJC52541.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_300_bf_scaffold_2377_curated_4
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3002..3988
DNA (987bp) protein (329aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YP89_9BRAD
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KGT76448.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2377_curated_5
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3978..4703
DNA (726bp) protein (242aa)
ABC transporter n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00037D91C3
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EHR02672.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hypothetical protein; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_2377_curated_6
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4700..5419
DNA (720bp) protein (240aa)
ABC transporter ATP-binding protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003645013
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJC59028.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_2377_curated_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5426..6301)
DNA (876bp) protein (292aa)
peptide ABC transporter permease n=1 Tax=Elioraea tepidiphila RepID=UPI0003765AA1
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EKE72977.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
oligopeptide ABC transporter permease; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_300_bf_scaffold_2377_curated_8
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6323..7249)
DNA (927bp) protein (309aa)
ABC transporter permease n=1 Tax=Elioraea tepidiphila RepID=UPI0003642AF2
Putative glutathione ABC transporter, permease protein GsiC {ECO:0000313|EMBL:EHM00983.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
ABC transporter permease; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_300_bf_scaffold_2377_curated_9
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7249..8235)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036DE4C0
Oligopeptide/dipeptide ABC transporter ATPase {ECO:0000313|EMBL:EKE72979.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
oligopeptide/dipeptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_2377_curated_10
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8232..9245)
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003810DE4
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJJ24866.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
peptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_2377_curated_11
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9256..10893)
DNA (1638bp) protein (546aa)
Oligopeptide ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZDM6_9BRAD
oligopeptide ABC transporter substrate-binding protein
Oligopeptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAM91922.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_cont_300_bf_scaffold_2377_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11084..11299
DNA (216bp) protein (72aa)
aquaporin Z n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F63484
aquaporin Z; K06188 aquaporin Z
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2377_curated_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11313..11747
DNA (435bp) protein (145aa)
Aquaporin Z n=1 Tax=Imtechella halotolerans K1 RepID=I0W9I8_9FLAO
aqpZ; Aquaporin Z; K06188 aquaporin Z
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 13 items

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