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SCNpilot_cont_300_bf_scaffold_591_curated

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Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_591_curated_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..136
DNA (135bp) protein (45aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

191..1303
DNA (1113bp) protein (371aa)
Extracellular ligand-binding receptor n=2 Tax=Rhodospirillum rubrum RepID=G2T9P2_RHORU
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1352..1921)
DNA (570bp) protein (190aa)
hypothetical protein; K13529 AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
transcriptional regulator n=1 Tax=Martelella mediterranea RepID=UPI0003787416
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_4
Burkholderia sp. USM B20, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1926..2657
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000375FF88
Uncharacterized protein {ECO:0000313|EMBL:KJE56017.1}; TaxID=1571773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. USM B20.;"
N-acetyltransferase GCN5
SCNpilot_cont_300_bf_scaffold_591_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2654..3823
DNA (1170bp) protein (390aa)
Putative membrane protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ISG8_BORPD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3934..4374
DNA (441bp) protein (147aa)
ribose 5-phosphate isomerase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B3233A
ywlF; ribose 5-phosphate isomerase RpiB
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4380..5687
DNA (1308bp) protein (436aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]
Serine hydroxymethyltransferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TL26_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5722..6186
DNA (465bp) protein (155aa)
NrdR family transcriptional regulator n=1 Tax=Novispirillum itersonii RepID=UPI00037A2BEC
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6191..7282
DNA (1092bp) protein (364aa)
ribD; riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Riboflavin biosynthesis protein RibD n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMS8_RHOCS
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7292..7894
DNA (603bp) protein (201aa)
Riboflavin synthase, alpha subunit n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TLM3_TISMK
ribE; riboflavin synthase subunit alpha
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7891..9042
DNA (1152bp) protein (384aa)
GTP cyclohydrolase II n=1 Tax=Oceanibaculum indicum P24 RepID=K2J3Z7_9PROT
ribBA; bifunctional: GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9045..9533
DNA (489bp) protein (163aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TLM1_TISMK
6,7-dimethyl-8-ribityllumazine synthase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9530..9997
DNA (468bp) protein (156aa)
transcription antitermination protein NusB n=1 Tax=Pannonibacter phragmitetus RepID=UPI000373FB17
nusB; transcription antitermination protein NusB; K03625 N utilization substance protein B
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10004..10990
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037E08A6
thiL; thiamin-monophosphate kinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11069..12301
DNA (1233bp) protein (411aa)
MFS permease n=1 Tax=Oceanibaculum indicum P24 RepID=K2J3Z2_9PROT
putative Permease of the major facilitator superfamily
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12450..14558
DNA (2109bp) protein (703aa)
hppA; membrane-bound proton-translocating pyrophosphatase; K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1]
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HX90_PARL1
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14631..15116)
DNA (486bp) protein (162aa)
SmpA/OmlA domain-containing protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K452_9PROT
putative outer membrane lipoprotein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15218..15712
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000313F03C
ubiquinol-cytochrome C chaperone
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15785..16306
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVN2_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16429..16623
DNA (195bp) protein (65aa)
50S ribosomal protein L32 n=2 Tax=Azospirillum lipoferum RepID=D3NTD1_AZOS1
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16676..17752
DNA (1077bp) protein (359aa)
plsX; putative glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15]
Phosphate acyltransferase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=PLSX_RHOCS rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17749..18720
DNA (972bp) protein (324aa)
fabH; 3-oxoacyl-ACP synthase (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y0K9_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_23
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18861..19166
DNA (306bp) protein (102aa)
Integration host factor subunit alpha n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z5K0_AZOL4
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
ihfA; integration host factor alpha-subunit (IHF-alpha); K04764 integration host factor subunit alpha
SCNpilot_cont_300_bf_scaffold_591_curated_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19203..19730
DNA (528bp) protein (176aa)
Transcriptional regulator, MerR family protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMR3_RHOCS
transcriptional regulator, MerR family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19919..20224
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SKR4_RHOPH
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_591_curated_26
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20187..21407)
DNA (1221bp) protein (407aa)
MFS transporter n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00035E537C
MFS transporter {ECO:0000313|EMBL:KFA88393.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
tetA; tetracycline resistance protein; K08151 MFS transporter, DHA1 family, tetracycline resistance protein rbh
SCNpilot_cont_300_bf_scaffold_591_curated_27
Mycobacterium triplex, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21455..22531
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Legionella longbeachae serogroup 1 (strain NSW150) RepID=D3HQ55_LEGLN
Uncharacterized protein {ECO:0000313|EMBL:CDO90940.1}; TaxID=47839 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium triplex.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_591_curated_28
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22718..23986
DNA (1269bp) protein (423aa)
Putative permease of the major facilitator superfamily MFS-1 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AL73_AZOBR
putative permease of the major facilitator superfamily MFS-1
Putative permease of the major facilitator superfamily MFS-1 {ECO:0000313|EMBL:CCC97985.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_cont_300_bf_scaffold_591_curated_29
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24006..24614)
DNA (609bp) protein (203aa)
Glutathione S-transferase {ECO:0000313|EMBL:BAN70233.1}; EC=2.5.1.18 {ECO:0000313|EMBL:BAN70233.1};; TaxID=1248727 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
gst; hypothetical protein; K00799 glutathione S-transferase [EC:2.5.1.18]
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002FD779B
SCNpilot_cont_300_bf_scaffold_591_curated_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24680..26017)
DNA (1338bp) protein (446aa)
Genomic scaffold, D445_Final2 n=1 Tax=Bordetella bronchiseptica D445 RepID=K4TCX2_BORBO
dioxygenase rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 76 in total

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