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SCNpilot_cont_300_bf_scaffold_855_curated

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Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_855_curated_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..714
DNA (714bp) protein (238aa)
ppk; polyphosphate kinase (EC:2.7.4.1); K00937 polyphosphate kinase [EC:2.7.4.1]
Polyphosphate kinase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IN50_RHOCS
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

812..2317
DNA (1506bp) protein (502aa)
exopolyphosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
Exopolyphosphatase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6Z8_AZOL4
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2338..3540)
DNA (1203bp) protein (401aa)
ribonuclease D; K03684 ribonuclease D [EC:3.1.13.5]
Ribonuclease D n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z2S3_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3620..5425
DNA (1806bp) protein (602aa)
aspS; aspartyl-tRNA synthetase AspS (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12]
Aspartyl-tRNA synthetase (Fragment) n=2 Tax=Candidatus Odyssella thessalonicensis RepID=D9I360_9RICK
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5635..6225
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HR56_AZOC5
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6188..7162)
DNA (975bp) protein (325aa)
2-oxo/hydroxy acid reductase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z7Z8_AZOL4
2-oxo/hydroxy acid reductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7442..8149
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z7Z9_AZOL4
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8143..8955
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z7Z9_AZOL4
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8965..10455
DNA (1491bp) protein (497aa)
AMP nucleosidase; K01241 AMP nucleosidase [EC:3.2.2.4]
AMP nucleosidase n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F73071
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10494..11399)
DNA (906bp) protein (302aa)
ROK family protein; K00847 fructokinase [EC:2.7.1.4]
ROK family Glucokinase with ambiguous substrate specificity n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HGN5_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11649..12881
DNA (1233bp) protein (411aa)
Sugar phosphate permease n=1 Tax=Burkholderia sp. BT03 RepID=J2SGX7_9BURK
major facilitator superfamily protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_12
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12974..13702
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI000365551A
Uncharacterized protein {ECO:0000313|EMBL:ETR77609.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_855_curated_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13951..14247
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVG7_9BRAD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14388..14783
DNA (396bp) protein (132aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_15
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14866..15972)
DNA (1107bp) protein (369aa)
Alkanal monooxygenase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D6A8_BRAJP
Alkane 1-monooxygenase {ECO:0000313|EMBL:ETR75474.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
alkanal monooxygenase
SCNpilot_cont_300_bf_scaffold_855_curated_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16042..16590
DNA (549bp) protein (183aa)
isochorismatase n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI00039FB3B2
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_17
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16587..17219)
DNA (633bp) protein (211aa)
TetR family transcriptional regulator n=1 Tax=Burkholderia terrae BS001 RepID=I5CKC5_9BURK
TetR family transcriptional regulator {ECO:0000313|EMBL:EIM96343.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_855_curated_18
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17304..18245
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPI1_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68162.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_cont_300_bf_scaffold_855_curated_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18302..19801)
DNA (1500bp) protein (500aa)
aldehyde dehydrogenase; K12254 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-]
Aldehyde dehydrogenase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MMH5_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19898..20065)
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLB6_9PROT
50S ribosomal protein L33; K02913 large subunit ribosomal protein L33
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20205..21854)
DNA (1650bp) protein (550aa)
carboxy-terminal-processing protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
Carboxy-terminal-processing protease n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NWT3_AZOS1
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21851..22255)
DNA (405bp) protein (135aa)
Zinc-finger protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TH67_TISMK
zinc-finger protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22279..24552)
DNA (2274bp) protein (758aa)
exoribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
Ribonuclease R n=1 Tax=Oceanibaculum indicum P24 RepID=K2JJ11_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24545..27241)
DNA (2697bp) protein (899aa)
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2]
DNA topoisomerase 1 n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H551_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27293..28369)
DNA (1077bp) protein (359aa)
DNA protecting protein DprA n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HX07_PARL1
DNA protecting protein DprA; K04096 DNA processing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_26
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28401..29321)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003675BCE
Dipeptide transport system permease protein DppC (TC 3.A.1.5.2
Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) {ECO:0000313|EMBL:CCH06010.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NH44784-1996.;"
SCNpilot_cont_300_bf_scaffold_855_curated_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29346..30551)
DNA (1206bp) protein (402aa)
Putative sugar (And other) transporter n=1 Tax=uncultured marine microorganism HF4000_005H07 RepID=B3T0D3_9ZZZZ
major facilitator superfamily protein; K08156 MFS transporter, DHA1 family, arabinose polymer transporter
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_855_curated_28
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30548..31576)
DNA (1029bp) protein (343aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=Thauera RepID=C4KDH8_THASP
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KIN91015.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
binding-protein-dependent transporters inner membrane component; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_300_bf_scaffold_855_curated_29
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31798..33378)
DNA (1581bp) protein (527aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B5480D
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACR02145.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
SCNpilot_cont_300_bf_scaffold_855_curated_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33486..34088)
DNA (603bp) protein (201aa)
glycerol-3-phosphate acyltransferase PlsY; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15]
Glycerol-3-phosphate acyltransferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLC1_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 59 in total

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