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SCNpilot_cont_300_bf_scaffold_1017_curated

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1017_curated_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1826)
DNA (1824bp) protein (608aa)
AsmA n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZU8_9PROT
protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1017_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1928..2140
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z522_AZOL4
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1017_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2156..2662)
DNA (507bp) protein (169aa)
Transcriptional regulator, HxlR family n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L712_FRASN
HxlR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1017_curated_4
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2724..3887)
DNA (1164bp) protein (388aa)
Na(+)/H(+) antiporter NhaA n=2 Tax=Rhodospirillum rubrum RepID=NHAA_RHORT rbh
Na+/H+ antiporter NhaA; K03313 Na+:H+ antiporter, NhaA family
Na(+)/H(+) antiporter NhaA {ECO:0000255|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000255|HAMAP-Rule:MF_01844}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
SCNpilot_cont_300_bf_scaffold_1017_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3975..4718)
DNA (744bp) protein (248aa)
Uncharacterized protein n=2 Tax=Rhodospirillum rubrum RepID=Q2RNE3_RHORT
hypothetical protein; K06890
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1017_curated_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4854..7370)
DNA (2517bp) protein (839aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K303_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE77239.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
putative ABC transporter, permease component
SCNpilot_cont_300_bf_scaffold_1017_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7396..8124)
DNA (729bp) protein (243aa)
Putative ABC transporter, ATPase component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGZ1_AZOBR
putative ABC transporter, ATPase component
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1017_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8178..8891
DNA (714bp) protein (238aa)
Lipolytic protein n=2 Tax=Rhodospirillum rubrum RepID=G2TFF8_RHORU
lipolytic protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1017_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8857..9402
DNA (546bp) protein (182aa)
2'-5' RNA ligase (EC:6.5.1.-); K01975 2'-5' RNA ligase [EC:6.5.1.-]
2''''-5'''' RNA ligase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B5CA7F
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1017_curated_10
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9384..10112)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EFB5_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ34859.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_300_bf_scaffold_1017_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10146..11192)
DNA (1047bp) protein (349aa)
aryldialkylphosphatase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B738C4
aryldialkylphosphatase; K07048 phosphotriesterase-related protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1017_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11225..12223)
DNA (999bp) protein (333aa)
MFS transporter n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI000364157C
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1017_curated_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12279..14432
DNA (2154bp) protein (718aa)
N,N-dimethylformamidase large subunit; K03418 N,N-dimethylformamidase [EC:3.5.1.56]
Probable N,N-dimethylformamidase large subunit n=1 Tax=alpha proteobacterium BAL199 RepID=A8TK20_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1017_curated_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14416..14901)
DNA (486bp) protein (162aa)
phosphotyrosine protein phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
Uncharacterized protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FV56_PHAMO
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1017_curated_15
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15032..15562
DNA (531bp) protein (177aa)
Putative lyase n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2G2D0_BURVI
Putative lyase {ECO:0000313|EMBL:ERJ37422.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1017_curated_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15703..16437
DNA (735bp) protein (245aa)
NAD-dependent deacetylase; K12410 NAD-dependent deacetylase [EC:3.5.1.-]
NAD-dependent protein deacylase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HRG0_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1017_curated_17
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16460..17443
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036CE2B4
Bradyrhizobium elkanii strain UASWS1015 Contig178, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48106.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1017_curated_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17463..18455)
DNA (993bp) protein (331aa)
twin-arginine translocation pathway signal n=1 Tax=Bradyrhizobium japonicum RepID=UPI000382023A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU39808.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_1017_curated_19
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18480..20180)
DNA (1701bp) protein (567aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IDW9_METNO
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ACL55691.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_300_bf_scaffold_1017_curated_20
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20314..21189
DNA (876bp) protein (292aa)
Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IDW8_METNO
LysR family transcriptional regulator {ECO:0000313|EMBL:ETR78739.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1017_curated_21
Leminorella grimontii, Leminorella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21221..21988)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CMAA1215 RepID=U7A0M3_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KFC93120.1}; TaxID=1005999 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Leminorella.;" source="Leminorella grimontii ATCC 33999 = DSM 5078.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1017_curated_22
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22107..22547
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDS1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR80138.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_cont_300_bf_scaffold_1017_curated_23
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22555..23034)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3RB97_CUPTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ72172.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
SCNpilot_cont_300_bf_scaffold_1017_curated_24
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23094..24635)
DNA (1542bp) protein (514aa)
NitT/TauT family transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HN81_9BRAD
NitT/TauT family transport system permease {ECO:0000313|EMBL:ERF86268.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1017_curated_25
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24855..25598
DNA (744bp) protein (248aa)
pqqc-like protein (coenzyme pqq synthesis c) (EC:1.3.3.11); K06137 pyrroloquinoline-quinone synthase [EC:1.3.3.11]
Coenzyme PQQ synthesis protein C n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X129_9BURK
Coenzyme PQQ synthesis protein C {ECO:0000313|EMBL:EON13226.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_300_bf_scaffold_1017_curated_26
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25624..25950
DNA (327bp) protein (109aa)
ferredoxin n=1 Tax=Cupriavidus sp. WS RepID=UPI0003708B08
Ferredoxin {ECO:0000313|EMBL:AJC16549.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
ferredoxin
SCNpilot_cont_300_bf_scaffold_1017_curated_27
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25984..26286
DNA (303bp) protein (101aa)
UDPglucose 6-dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HPB1_9BRAD
UDPglucose 6-dehydrogenase {ECO:0000313|EMBL:ERF86271.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1017_curated_28
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26296..26664
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000362C4F0
Putative ferredoxin, 2Fe-2S iron-sulfur cluster binding protein {ECO:0000313|EMBL:KGJ70418.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
putative ferredoxin
SCNpilot_cont_300_bf_scaffold_1017_curated_29
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26754..27500
DNA (747bp) protein (249aa)
General L-amino acid transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HN87_9BRAD
Putative GntR family transcriptional regulator {ECO:0000313|EMBL:KGJ70419.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1017_curated_30
bacterium YEK0313, Bacteria

Not on your lists

comp(27742..28851)
DNA (1110bp) protein (370aa)
Putative acyl-CoA transferase/carnitine dehydratase n=1 Tax=Caulobacter sp. AP07 RepID=J3AR24_9CAUL
Formyl-coenzyme A transferase {ECO:0000313|EMBL:CEJ10557.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
L-carnitine dehydratase/bile acid-inducible protein F
Displaying items 1-30 of 41 in total

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