ggKbase home page

SCNpilot_cont_300_bf_scaffold_2230_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_3

near complete RP 46 / 55 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: comp(4375..5994)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000376589A similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 539.0
  • Bit_score: 950
  • Evalue 7.70e-274
AMP-dependent synthetase and ligase similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 536.0
  • Bit_score: 690
  • Evalue 4.50e-196
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACS22455.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 536.0
  • Bit_score: 690
  • Evalue 2.00e-195

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1620
GTGGCGCTTTCCTACTGGCCCGCCGACACCTCGCGGCCGGTTCTCGAGCTGACGGCCGGCGACGCGCTACGCGAGGCCGCCGCCGATAGGCCAGACCGCGTTGCCATTGTCGAGGTGGTCCCGCAGGGGATGGCCTCGCTGGTCGGCGCTGCGGCGACGGACCGGCGCTGGACCTATGCCGAGCTGCTCACCGAGGCCGAAAACTGCGCGCATTGGCTGCTCGAGAGCTACTCTCCGGGAGAGCGGATCTGCATCTGGGCACCGAATGTGCCGGAGTGGGTCGTCGTGCAGTACGGCGCGGCCTTGGCGGGCCTCGTGCTCGTCACGGCCAACCCGGCGCTGCGCGCCGGTGAACTGCGCTATGTGCTGCGTCAATCGCAGGCCGTCGGATTGATTCATGCCGACCAGTTCCGTGGCACGGATATGGCCGCGATTGTCCGCGACGTCGCCAACGAGGTCCGTGAAACGTTCTGCATTGCCGATTGGCAGGCCACGGTGCGGGCCAAGGTCCGCACCGGCGTCTTGCCGGCCGTCTATCCAGGCGATCCTGCCCAGGTGCAATACACGTCCGGTACGACGGGCGAGCCGAAAGGAGCCCTGCTGCACCATCGCGGGCTGGTGACGAATGCCAGCTATGTCGCTGCGCGCGCCGGGTTGGATCACGGTGTCTTCGTCAGTCCGCTGCCACTGTTTCATACCGCGGGATCGGCCATGAGTGTGCTCGGATGCGTGACGACGCGCTCGACTTATGTGCTGCCGTTGCTGTTTGATCCGGAGCTCGTGCTGGCTGCCATCGAACGGGAGCGCGGTGATCTCATCCTCGGCGTGCCCACGATGCTGATCGCCTTGCTGGAGCAGCAACGCAAGAGCCCTCACGACCTCTCGTCGTTGCGCACCGCCCTGTGCGGGGGAGCGCCGGTTCCGGTGGAACTGCTGCGGCGTGTCGAGGAAGGGCTCGGCTGCGACCTCACGCCTGTCTATGGCCAGACCGAACTCAGCCCGATCGTGTGCCAGACGTCGCCGGACGACAGGCTCGAGGACAAGGCGAACAGTTCAGGCCGCCCGCTCTGGCAGGTCGAGGTCAGGGTCGTCGACCCGAACAGCGGCGAGACGCTGCCCTGCGGTGCCGAGGGCGAGATACAGGCACGCGGTTACCAGAGCATGATCGGCTACTTCGACATGCCGAAGGCAACGGCCGAAACCATCGAAGCGGAGGGCTGGGTGCGTACCGGCGACCTCGGCACTATGGATTCGCGCGGATACGTGCAGATCACCGGTCGGCTGCGCGACATGATCATCCGCGGAGGTGAGAATATCTATCCGCGCGAGATCGAAGCCGTTCTGTTCGCCCATGCCGCAGTGGCCGATGTTGCCGTATTCGGCGTTCCCGACGCCCATTGGGGAGAGATTGTCGGCGCGGCGGTTCGCGCCACCGATCCGACATCGCCGCCGGCCGTGCAGGAGCTGCAGGCGCATTGTCGGGCCTCGCTCGCGCCCTTCAAGATGCCGACCGAGTGGTTCATCTGCTCGGAATTTCCGCTCACGGGTTCCGGCAAGGTGCAGAAGTTCAAGCTTCGAGAGCAACTGCAATCCGGAGCCCTGGCGCGGCTCGGCCGCTGA
PROTEIN sequence
Length: 540
VALSYWPADTSRPVLELTAGDALREAAADRPDRVAIVEVVPQGMASLVGAAATDRRWTYAELLTEAENCAHWLLESYSPGERICIWAPNVPEWVVVQYGAALAGLVLVTANPALRAGELRYVLRQSQAVGLIHADQFRGTDMAAIVRDVANEVRETFCIADWQATVRAKVRTGVLPAVYPGDPAQVQYTSGTTGEPKGALLHHRGLVTNASYVAARAGLDHGVFVSPLPLFHTAGSAMSVLGCVTTRSTYVLPLLFDPELVLAAIERERGDLILGVPTMLIALLEQQRKSPHDLSSLRTALCGGAPVPVELLRRVEEGLGCDLTPVYGQTELSPIVCQTSPDDRLEDKANSSGRPLWQVEVRVVDPNSGETLPCGAEGEIQARGYQSMIGYFDMPKATAETIEAEGWVRTGDLGTMDSRGYVQITGRLRDMIIRGGENIYPREIEAVLFAHAAVADVAVFGVPDAHWGEIVGAAVRATDPTSPPAVQELQAHCRASLAPFKMPTEWFICSEFPLTGSGKVQKFKLREQLQSGALARLGR*