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SCNpilot_cont_300_bf_scaffold_2230_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2230_curated_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..320
DNA (318bp) protein (106aa)
hypothetical protein; K02609 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ATG7_STRRD
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2230_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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317..889
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9DG51_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2230_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1251..1763
DNA (513bp) protein (171aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A6L2_9PROT
Carboxylesterase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2230_curated_4
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1843..2781
DNA (939bp) protein (313aa)
D-cysteine desulfhydrase {ECO:0000313|EMBL:EKE72934.1}; EC=4.4.1.15 {ECO:0000313|EMBL:EKE72934.1};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
D-cysteine desulfhydrase; K05396 D-cysteine desulfhydrase [EC:4.4.1.15]
D-cysteine desulfhydrase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JR53_9PROT
SCNpilot_cont_300_bf_scaffold_2230_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2793..4328
DNA (1536bp) protein (512aa)
MlrC family protein 3 n=1 Tax=Oceanibaculum indicum P24 RepID=K2IRP4_9PROT
MlrC family protein 3
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2230_curated_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4375..5994)
DNA (1620bp) protein (540aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000376589A
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACS22455.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_300_bf_scaffold_2230_curated_7
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5997..6860)
DNA (864bp) protein (288aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:EQM34894.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EQM34894.1};; TaxID=1381122 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis DN1.;"
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00030297FA
SCNpilot_cont_300_bf_scaffold_2230_curated_8
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6853..7359)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003133FEF
TetR family transcriptional regulator
Tax=BJP_IG2102_Porphyrobacter_62_18
SCNpilot_cont_300_bf_scaffold_2230_curated_9
unknown

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7853..8194
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2230_curated_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8231..9109)
DNA (879bp) protein (293aa)
Pirin-like protein id=3022940 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Putative BCR, YhhW family protein; K06911
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2230_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9487..10908
DNA (1422bp) protein (474aa)
peptidase M24 n=1 Tax=Rhizobium loti RepID=UPI00036D7EF6
peptidase, M23/M37 family
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2230_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11050..12075
DNA (1026bp) protein (342aa)
Amino acid ABC transporter, substrate-binding component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALT4_AZOBR
aapJ; amino acid ABC transporter, substrate-binding component
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2230_curated_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12196..13221
DNA (1026bp) protein (342aa)
Amino acid ABC transporter, substrate-binding component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALT4_AZOBR
aapJ; amino acid ABC transporter, substrate-binding component
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2230_curated_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13375..14289
DNA (915bp) protein (305aa)
General L-amino acid transport system substrate-binding protein n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LP35_9PROT
aapJ; amino acid ABC transporter, substrate-binding component
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 14 items

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