ggKbase home page

SCNpilot_cont_300_bf_scaffold_1271_curated_14

Organism: scnpilot_dereplicated_Alphaproteobacteria_3

near complete RP 46 / 55 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: 13923..14897

Top 3 Functional Annotations

Value Algorithm Source
Cobalamin biosynthesis protein CobD n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SEU8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 324.0
  • Bit_score: 404
  • Evalue 7.30e-110
cobD; anaerobic pathway of cobalamin biosynthesis CobD similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 323.0
  • Bit_score: 404
  • Evalue 3.90e-110
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 324.0
  • Bit_score: 404
  • Evalue 1.00e-109

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGTTCGCGAGTCTTGCCCTCGTCGCCGTCGCCATCGAAGCAGCCGTTGGATATCCCGACCCTCTGTTTCGCGCGATCGGCCATCCAGTGAGCTGGATCGGTCGGCTCATAGCATGGGCCGACAGGTCGTGGAATTCGCCGCACGCCTCGTTCGAGCACCGCCGCACCATGGGCGTGCTGCTGCTGCTCCTTCTTCTGGGCAGCAGCCTTTTAGTAGGTCTCGTGGTGACGGACTTGATCGACGACCTGTTCGACGATCTGTTCGCTCTGATGATCGGCGGCCTGCTGGCGAGTTCGCTGATCGCGCAGCGCAGCCTCGCCGAGCATGTCGCCGAGGTGGCACGCGGCCTCGATGCGCAGGGCCTTGAAGGCGGACGCGCCGCCGTCTCGCGCATCGTGGGCCGCGACACCCAGGTGCTCGACGAGGCGGGCGTTTGTCGTGCCGCCATCGAAAGCCTCGCCGAGAACTTTTCCGACGGCGTCGTGGCGCCGCTCTTCTGGATGGTGATGGGCGGGCTGCCCGGCGCGCTCGCCTACAAGGCAATCAACACGGCCGATTCCATGGTCGGTCACAAGTCCGACCGCCATCTTGCCTTCGGTTGGGCCTCGGCGCGCTGCGACGACTTCGTGAACCTGCCGGCGTCGCGGCTTGCGGCCCTCTGGCTTTGTCTCGCCGCGGCGCTGCGGCCGGGCTTCTCGCCGGCTGCGGCATGGGACGCGGTGCGGCGCGATTCCGCCCATCATCGTTCTCCCAATGCCGGCTGGCCCGAAGCGGCGATGGCCGGTGCGCTCGGTATCCGGTTGGCAGGGCCGCGCGTCTATGGCGGTGTTGCCGTGGACGACCGCTGGATGGGCAATGGCCGTGCCGATCTGACGGCCGCCGATATCCGTCGCGCGCTGCAGCTTTACCGCGTGGCCTGTGGTGTGCAGGCCGGCGCCATCGCGCTGCTGGCCGCGATCATTGTCCTGGCGTGA
PROTEIN sequence
Length: 325
MFASLALVAVAIEAAVGYPDPLFRAIGHPVSWIGRLIAWADRSWNSPHASFEHRRTMGVLLLLLLLGSSLLVGLVVTDLIDDLFDDLFALMIGGLLASSLIAQRSLAEHVAEVARGLDAQGLEGGRAAVSRIVGRDTQVLDEAGVCRAAIESLAENFSDGVVAPLFWMVMGGLPGALAYKAINTADSMVGHKSDRHLAFGWASARCDDFVNLPASRLAALWLCLAAALRPGFSPAAAWDAVRRDSAHHRSPNAGWPEAAMAGALGIRLAGPRVYGGVAVDDRWMGNGRADLTAADIRRALQLYRVACGVQAGAIALLAAIIVLA*