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SCNpilot_cont_300_bf_scaffold_1271_curated

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1271_curated_1
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..512)
DNA (510bp) protein (170aa)
Autotransporter-associated beta strand repeat protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQI4_9RHIZ
outer membrane autotransporter barrel domain-containing protein
Tax=BJP_S1_SUB10_Methylophilales_55_32
SCNpilot_cont_300_bf_scaffold_1271_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2157..2516
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=V6F0A3_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1271_curated_3
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2521..4008
DNA (1488bp) protein (496aa)
UPF0061 protein MicloDRAFT_00008900 n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z298_9RHIZ
hypothetical protein rbh
UPF0061 protein MicloDRAFT_00008900 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
SCNpilot_cont_300_bf_scaffold_1271_curated_4
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4065..4502)
DNA (438bp) protein (146aa)
UPI0003CF8A4E related cluster n=1 Tax=unknown RepID=UPI0003CF8A4E
Membrane protein {ECO:0000313|EMBL:ESW75459.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1271_curated_5

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comp(4596..5525)
DNA (930bp) protein (310aa)
Uncharacterized protein n=2 Tax=mine drainage metagenome RepID=T1BUI5_9ZZZZ
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49146.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
YVTN beta-propeller repeat-containing protein
SCNpilot_cont_300_bf_scaffold_1271_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5551..6003)
DNA (453bp) protein (151aa)
chromate resistance protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000300CD10
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1271_curated_7
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6000..6938)
DNA (939bp) protein (313aa)
manganese and iron superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
UPI0003CED9E5 related cluster n=1 Tax=unknown RepID=UPI0003CED9E5
Superoxide dismutase {ECO:0000313|EMBL:ESW93152.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
SCNpilot_cont_300_bf_scaffold_1271_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7053..8051
DNA (999bp) protein (333aa)
ChrB protein n=1 Tax=Afipia birgiae RepID=UPI0002DADDC5
ChrB protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1271_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8048..9451
DNA (1404bp) protein (468aa)
UPI0003CEA922 related cluster n=1 Tax=unknown RepID=UPI0003CEA922
chromate transporter; K07240 chromate transporter
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1271_curated_10
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9480..10187
DNA (708bp) protein (236aa)
hypothetical protein; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
superoxide dismutase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000374CFB9
Superoxide dismutase Mn {ECO:0000313|EMBL:AHY54665.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
SCNpilot_cont_300_bf_scaffold_1271_curated_11
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10198..10815
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RMH2_COMTE
Putative uncharacterized protein {ECO:0000313|EMBL:EHN66500.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni ATCC 11996.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1271_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11065..12891)
DNA (1827bp) protein (609aa)
sulfatase (EC:3.1.6.6); K01133 choline-sulfatase [EC:3.1.6.6]
Twin-arginine translocation pathway signal protein n=1 Tax=Pandoraea sp. RB-44 RepID=V5UKY7_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1271_curated_13
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12899..13858)
DNA (960bp) protein (320aa)
Putative threonine-phosphate decarboxylase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z6H9_9BRAD
putative threonine-phosphate decarboxylase
Putative threonine-phosphate decarboxylase {ECO:0000313|EMBL:BAM88782.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_cont_300_bf_scaffold_1271_curated_14
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13923..14897
DNA (975bp) protein (325aa)
Cobalamin biosynthesis protein CobD n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SEU8_9RHIZ
cobD; anaerobic pathway of cobalamin biosynthesis CobD
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCNpilot_cont_300_bf_scaffold_1271_curated_15
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14881..16371)
DNA (1491bp) protein (497aa)
cobyric acid synthase CobQ; K02232 adenosylcobyric acid synthase [EC:6.3.5.10]
Cobyric acid synthase n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9W952_METEP
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=419610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain PA1).;"
SCNpilot_cont_300_bf_scaffold_1271_curated_16
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16371..16982)
DNA (612bp) protein (204aa)
cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17); K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17]
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:CAL78624.1}; EC=2.5.1.17 {ECO:0000313|EMBL:CAL78624.1};; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YXJ8_BRASO
SCNpilot_cont_300_bf_scaffold_1271_curated_17
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17136..17759
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EGG2_BRASB
hypothetical protein; K03192 urease accessory protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ35256.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_300_bf_scaffold_1271_curated_18
unknown

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comp(17588..18334)
DNA (747bp) protein (249aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1271_curated_19
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18380..18775
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RTM6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD85303.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1271_curated_20
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18772..19806
DNA (1035bp) protein (345aa)
CobW n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SE21_9RHIZ
CobW {ECO:0000313|EMBL:AHB48209.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
cobalamin synthesis protein cobW; K02234 cobalamin biosynthesis protein CobW
SCNpilot_cont_300_bf_scaffold_1271_curated_21
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19823..22885
DNA (3063bp) protein (1021aa)
Putative cobaltochelatase cobN subunit {ECO:0000313|EMBL:CCE05296.1}; EC=6.6.1.2 {ECO:0000313|EMBL:CCE05296.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
Putative cobaltochelatase cobN subunit n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TFQ8_9BRAD
cobN; putative cobaltochelatase CobN
Displaying 21 items

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