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SCNpilot_cont_300_bf_scaffold_1986_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_3

near complete RP 46 / 55 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: 4153..4524

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, HxlR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XBK8_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 111.0
  • Bit_score: 136
  • Evalue 1.40e-29
transcriptional regulator, HxlR family similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 111.0
  • Bit_score: 136
  • Evalue 4.40e-30
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:AGU49871.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 111.0
  • Bit_score: 136
  • Evalue 2.00e-29

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
ATGAGCTTCGCGCCAACCGCGAAAAAGAGGGACCTCGACGTGCCGGCGCAGCGGCGCCCCGACGACTGCCCGGTCGAGGCGTGGCTCGCTTTCCTCGGCCATCGCTGGAACGCGCTGGTGCTGTGGCATCTGCAGGGCGGCGCCAGGCGGCACAATGAATTGGCGGTTCTTCTGCCCGGCATCGCGCCGAAGGTGCTGTCGGAGCGTCTCGAGGGGCTGGAGCGGCGGGGCCTGATCCTGCGCGCGCCGATTGCCGCTTTCCCGCGCGGCGTTCTCTATGCGCTGTCGCCGGCCGGCAAGGAGCTGGTCGGCATTCTCGATCGCCTCGAACTCTGGTCGCGCCAGAGCATGCGCCGCCCTCAGCCCGAATAG
PROTEIN sequence
Length: 124
MSFAPTAKKRDLDVPAQRRPDDCPVEAWLAFLGHRWNALVLWHLQGGARRHNELAVLLPGIAPKVLSERLEGLERRGLILRAPIAAFPRGVLYALSPAGKELVGILDRLELWSRQSMRRPQPE*