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SCNpilot_cont_300_bf_scaffold_573_curated_15

Organism: scnpilot_dereplicated_Alphaproteobacteria_3

near complete RP 46 / 55 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: 9859..11268

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 468.0
  • Bit_score: 602
  • Evalue 3.70e-169
3-isopropylmalate dehydratase, large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 468.0
  • Bit_score: 601
  • Evalue 2.40e-169
3-isopropylmalate dehydratase large subunit n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V123_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 468.0
  • Bit_score: 601
  • Evalue 7.60e-169

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
ATGGCGCGTCCTCGCACCATGTTCGAGAAGATCTGGCAGGATCATCTCATCCGGGAGGACGAGGACGGCGCCTGCCTGCTGTTCGTCGGCCGCCATCTCGCCCATGACGGGCTCTATCACGGGTTCAATTTCCTGGAAGGCCGTGGTCTCGCCCTCGCGCGCGCCGATCAGACCTTTGCTACGCCGGATCATGGCATTTCGACCCTGAGCCACCGCCTCGACGACATCGTCGATCCCGTGCAGCACCGCGTCGTCAAGGCCCTGCAGGACAATGCTGCGCGGCATGGCTTCACTCTGTTCGGGCTGGAGGATCCGCGGCAGGGGATCGTGCATGTCGTGGGACCCGAGCAAGGTTTGACCCAGCCGGGATTGCTGATCGTCTGCGGCGACAGCCATACATCGACCCATGGCGCGCTGGGCGCGCTCGCCTTCGGCATCGGCGCCTCCGAGGTCTGCCATGTGCTGGCGACGCAGACCTTGTGGCAGCGCAAGCCGCGGACCCTGCGCGTCACCGTCGACGGTGCCCGTCCGGCTGGCGTCACGGCCAAGGACGTGATCCTGGCGATCATCGCCCGGATCGGTGCCAACGGCGCCTCCGGCCACGTCATCGAGTATGCCGGTTCGACGATCCGTGACATGTCGATCGAGGAGCGATTGACGGTCTGCAACATGTCGATCGAGGCTGGCGCGCGGGCCGGCATGGTCGCACCGGACGACAAGACCTATGCCTTCCTGAAAGGCCGTCCCTTTGCGCCGACAGGCGATGCCTGGGCGTTGGCGGAAGCCCACTGGCGTTCGCTGCCAAGCGACGGTGGCGCAGTATTCGATCGCGAGGAACGGCTGGACGCGACGCTGTTCGCCCCCATGGTAAGCTGGGGCACCAATCCCTCCGAAGTCGCACCGATCACCGGCGTGGTGCCCGATCCGGCCGATGCTGCCGAAGAGACAGCGCGCGCCGCGATGCAACGCTCGCTCGACTATATGGGGCTCGCGGCGGGCATGCGCCTTGCCGACGTCGCGGTCGACCAGGTCTTCATTGGCTCCTGCACCAATGCGCGGATCGAGGATCTGCGCGCCGCCGCGGCGATCGCCCGTCAAGGTCGTGCCGTGGTGCCCGTGATGGTTTCGCCCGGCTCGACGCTGGTGAAACGGCAGGCCGAGGCGGAGGGGCTGGCGCAGATCTTTCGCGAGGCCGGCTTCGAGTGGCGCGAGTCGGGTTGCTCGATGTGCTGCGGCATGAACGGAGACCTGGTCGCGGCCGGCAAGCGCTGCGCATCGACGTCGAACCGCAATTTCCCCGGCCGCCAGGGGCCGGGCAGCCGCACGCATCTGGTCAGTCCGGCCATGGCGGCGGCCACCGCGCTCAGCGGCCGTCTCAGCGACCCACGCGATCTGATGGGGGCGGCATGA
PROTEIN sequence
Length: 470
MARPRTMFEKIWQDHLIREDEDGACLLFVGRHLAHDGLYHGFNFLEGRGLALARADQTFATPDHGISTLSHRLDDIVDPVQHRVVKALQDNAARHGFTLFGLEDPRQGIVHVVGPEQGLTQPGLLIVCGDSHTSTHGALGALAFGIGASEVCHVLATQTLWQRKPRTLRVTVDGARPAGVTAKDVILAIIARIGANGASGHVIEYAGSTIRDMSIEERLTVCNMSIEAGARAGMVAPDDKTYAFLKGRPFAPTGDAWALAEAHWRSLPSDGGAVFDREERLDATLFAPMVSWGTNPSEVAPITGVVPDPADAAEETARAAMQRSLDYMGLAAGMRLADVAVDQVFIGSCTNARIEDLRAAAAIARQGRAVVPVMVSPGSTLVKRQAEAEGLAQIFREAGFEWRESGCSMCCGMNGDLVAAGKRCASTSNRNFPGRQGPGSRTHLVSPAMAAATALSGRLSDPRDLMGAA*