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SCNpilot_cont_300_bf_scaffold_573_curated

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Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_573_curated_1
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1044
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036739D3
putative Bug-like extra-cytoplasmic solute receptor, TTT family
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_cont_300_bf_scaffold_573_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(990..1706)
DNA (717bp) protein (239aa)
Short-chain dehydrogenase n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89P43_BRADU
short-chain dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_573_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1857..2237
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0HNT3_STRA9
endoribonuclease L-PSP
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_573_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2257..2544)
DNA (288bp) protein (96aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_573_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2671..2988
DNA (318bp) protein (106aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_573_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3014..4006)
DNA (993bp) protein (331aa)
Lysophospholipase, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IWE3_RHOCS
lysophospholipase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_573_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4032..4214
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZED1_AZOL4
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_573_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4224..4682
DNA (459bp) protein (153aa)
MaoC-like protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F3A6_9DELT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_573_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4682..5458
DNA (777bp) protein (259aa)
enoyl-CoA hydratase; K01692 enoyl-CoA hydratase [EC:4.2.1.17]
Enoyl-CoA hydratase/isomerase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T095_CAUSK
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_573_curated_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5458..6267
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTE2_9PROT
phytanoyl-CoA dioxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_573_curated_11
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6395..7603
DNA (1209bp) protein (403aa)
ABC transporter permease n=1 Tax=Bradyrhizobium japonicum RepID=UPI000371EE2A
ABC transporter permease {ECO:0000313|EMBL:KJC52848.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_573_curated_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

7611..8513
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035E7ED5
IclR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
SCNpilot_cont_300_bf_scaffold_573_curated_13
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8528..8956
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REL7_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG78543.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_573_curated_14
bacterium YEK0313, Bacteria

Not on your lists

8968..9849
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. AU12-08 RepID=S9S3T5_9RALS
2,3-dimethylmalate lyase {ECO:0000313|EMBL:CEJ13420.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
isocitrate lyase and phosphorylmutase
SCNpilot_cont_300_bf_scaffold_573_curated_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9859..11268
DNA (1410bp) protein (470aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
3-isopropylmalate dehydratase, large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase large subunit n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V123_VARPE
SCNpilot_cont_300_bf_scaffold_573_curated_16
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11265..11888
DNA (624bp) protein (208aa)
3-isopropylmalate dehydratase, small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase small subunit n=1 Tax=uncultured microorganism RepID=F8UGW0_9ZZZZ
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
SCNpilot_cont_300_bf_scaffold_573_curated_17
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11938..13068
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00036CADCB
Luciferase-like protein {ECO:0000313|EMBL:AIJ24707.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
luciferase-like protein
SCNpilot_cont_300_bf_scaffold_573_curated_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13069..13848
DNA (780bp) protein (260aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEA28571.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEA28571.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV25_PSEUX
3-oxoacyl-ACP reductase
SCNpilot_cont_300_bf_scaffold_573_curated_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13876..14898)
DNA (1023bp) protein (341aa)
alcohol dehydrogenase; K00344 NADPH2:quinone reductase [EC:1.6.5.5]
Alcohol dehydrogenase zinc-binding domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1R9_ALIDB
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_573_curated_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14920..15687)
DNA (768bp) protein (256aa)
Enoyl-CoA hydratase/isomerase family protein 4 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HNC1_ACHXA
enoyl-CoA hydratase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_573_curated_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15697..16074)
DNA (378bp) protein (126aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_573_curated_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16071..16538)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7R3_GEMAT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_573_curated_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16543..17730)
DNA (1188bp) protein (396aa)
membrane protein n=1 Tax=Nevskia ramosa RepID=UPI0003B5F928
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_573_curated_24
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17818..19440
DNA (1623bp) protein (541aa)
aceB; malate synthase A (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9]
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Malate synthase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUY1_RHOCS
SCNpilot_cont_300_bf_scaffold_573_curated_25
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19451..20983
DNA (1533bp) protein (511aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035E6523
Fatty-acid (Long-chain)--CoA ligase {ECO:0000313|EMBL:GAN77099.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
lcfB2; long-chain-fatty-acid--CoA ligase
SCNpilot_cont_300_bf_scaffold_573_curated_26
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20998..21966
DNA (969bp) protein (323aa)
Putative 2-dehydropantoate 2-reductase {ECO:0000313|EMBL:KDM65287.1}; EC=1.1.1.169 {ECO:0000313|EMBL:KDM65287.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
putative 2-dehydropantoate 2-reductase (EC:1.1.1.169); K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169]
Putative 2-dehydropantoate 2-reductase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J3Y4_ACIMA
SCNpilot_cont_300_bf_scaffold_573_curated_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21980..22408
DNA (429bp) protein (143aa)
Acetyltransferase n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9WXL3_9NOST
acetyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_573_curated_28
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22413..23114)
DNA (702bp) protein (234aa)
GntR family transcriptional regulator n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B38E45
GntR family transcriptional regulator
FCD domain protein {ECO:0000313|EMBL:KDD63048.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
SCNpilot_cont_300_bf_scaffold_573_curated_29
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23202..24119
DNA (918bp) protein (306aa)
taurine dioxygenase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B70FC4
putative taurine dioxygenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
SCNpilot_cont_300_bf_scaffold_573_curated_30
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24143..25144
DNA (1002bp) protein (334aa)
hypothetical protein id=12549773 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EER58642.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
Displaying items 1-30 of 44 in total

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