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SCNpilot_expt_1000_bf_scaffold_358_curated

Search features with annotation key words

Displaying items 121-150 of 652 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_358_curated_121
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118989..119396)
DNA (408bp) protein (136aa)
phage tail protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0C16
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
SCNpilot_expt_1000_bf_scaffold_358_curated_122
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119504..119902)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L1Y2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHK92378.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_358_curated_123
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120072..120620)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C3B5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EIZ78287.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_358_curated_124
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120717..121847)
DNA (1131bp) protein (377aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IJM0_9SPHN
Phage capsid protein {ECO:0000313|EMBL:KHK92379.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_358_curated_125
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122019..122426)
DNA (408bp) protein (136aa)
Possible phage protease n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N5Z5_ERYLH
phage protease; K06904
Possible phage protease {ECO:0000313|EMBL:ABC64896.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (strain HTCC2594).;"
SCNpilot_expt_1000_bf_scaffold_358_curated_126
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122423..122749)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PA05_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDL49060.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
SCNpilot_expt_1000_bf_scaffold_358_curated_127
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122746..123888)
DNA (1143bp) protein (381aa)
Portal protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0I3S9_9SPHN
Portal protein {ECO:0000313|EMBL:KHL24547.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
genetic exchange protein
SCNpilot_expt_1000_bf_scaffold_358_curated_128
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124936..126258)
DNA (1323bp) protein (441aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IJL6_9SPHN
ATP-binding protein {ECO:0000313|EMBL:KHK92382.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_358_curated_129
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126245..126775)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E700
Uncharacterized protein {ECO:0000313|EMBL:EJL21093.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_358_curated_130
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126979..127611
DNA (633bp) protein (211aa)
DedA n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3M2_NOVAD
DedA-family protein {ECO:0000313|EMBL:KHS41639.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_358_curated_131
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127614..128243)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GNA9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02172.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein; K07090
SCNpilot_expt_1000_bf_scaffold_358_curated_132
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128481..128990)
DNA (510bp) protein (170aa)
membrane protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E704
Uncharacterized protein {ECO:0000313|EMBL:GAM02102.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
rhodanese-like protein
SCNpilot_expt_1000_bf_scaffold_358_curated_133
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128993..129319)
DNA (327bp) protein (109aa)
transcriptional regulator n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E705
Transcriptional regulator {ECO:0000313|EMBL:AHE52706.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
regulatory protein ArsR
SCNpilot_expt_1000_bf_scaffold_358_curated_134
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

129383..130267
DNA (885bp) protein (295aa)
beta-lactamase n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0C29
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
SCNpilot_expt_1000_bf_scaffold_358_curated_135
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130368..131249
DNA (882bp) protein (294aa)
TonB family protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2PVE4_9SPHN
TonB-like protein; K03832 periplasmic protein TonB
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCNpilot_expt_1000_bf_scaffold_358_curated_136
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131268..132488)
DNA (1221bp) protein (407aa)
8-amino-7-oxononanoate synthase {ECO:0000313|EMBL:AKH43486.1}; EC=2.3.1.47 {ECO:0000313|EMBL:AKH43486.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
serine palmitoyltransferase (EC:2.3.1.50); K00639 glycine C-acetyltransferase [EC:2.3.1.29]
Serine palmitoyltransferase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WEY5_9SPHN
SCNpilot_expt_1000_bf_scaffold_358_curated_137
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132494..132736)
DNA (243bp) protein (81aa)
Putative acyl carrier protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZUQ2_9SPHN
hypothetical protein
Putative acyl carrier protein {ECO:0000313|EMBL:GAD49109.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
SCNpilot_expt_1000_bf_scaffold_358_curated_138
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133012..133383)
DNA (372bp) protein (124aa)
Putative response regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKL4_9SPHN
Polar-differentiation response regulator DivK {ECO:0000313|EMBL:AKH43488.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
two-component system PleD family response regulator DivK; K11443 two-component system, cell cycle response regulator DivK
SCNpilot_expt_1000_bf_scaffold_358_curated_139
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133725..134351
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZDJ9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43489.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_358_curated_140
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134348..134806
DNA (459bp) protein (153aa)
Endoribonuclease L-PSP n=1 Tax=Sphingomonas sp. LH128 RepID=J8W5D8_9SPHN
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:EZP80757.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
SCNpilot_expt_1000_bf_scaffold_358_curated_141
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134790..135557
DNA (768bp) protein (256aa)
Glycerophosphoryl diester phosphodiesterase family protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZUQ6_9SPHN
Glycerophosphoryl diester phosphodiesterase family protein {ECO:0000313|EMBL:GAD49114.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
glycerophosphoryl diester phosphodiesterase
SCNpilot_expt_1000_bf_scaffold_358_curated_142
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135568..136701
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKL8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43492.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein; K09919 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_358_curated_143
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136725..137057)
DNA (333bp) protein (111aa)
Sel1 repeat-containing protein n=2 Tax=Novosphingobium RepID=F6IJK5_9SPHN
Sel1 repeat protein {ECO:0000313|EMBL:AKH43493.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Sel1 repeat-containing protein; K07126
SCNpilot_expt_1000_bf_scaffold_358_curated_144
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137309..137767
DNA (459bp) protein (153aa)
RNA polymerase-binding transcription factor DksA n=2 Tax=Novosphingobium nitrogenifigens RepID=F1ZDJ4_9SPHN
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein
SCNpilot_expt_1000_bf_scaffold_358_curated_145
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137929..138312
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=2 Tax=Novosphingobium RepID=F6IJK3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43495.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_358_curated_146
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138941..139858
DNA (918bp) protein (306aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZUQ8_9SPHN
Putative binding protein YgiS {ECO:0000313|EMBL:AKH43496.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
dipeptide-binding ABC transporter protein
SCNpilot_expt_1000_bf_scaffold_358_curated_147
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

139894..140268
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKM4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43497.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_358_curated_148
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140509..143106
DNA (2598bp) protein (866aa)
DNA mismatch repair protein MutS n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YL75_9SPHN
DNA mismatch repair protein MutS {ECO:0000313|EMBL:AKH43498.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS
SCNpilot_expt_1000_bf_scaffold_358_curated_149
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143139..143327
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IFK6_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ61218.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
SCNpilot_expt_1000_bf_scaffold_358_curated_150
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143389..143766)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PA37_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHL24522.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
hypothetical protein
Displaying items 121-150 of 652 in total

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