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SCNpilot_expt_1000_bf_scaffold_819_curated_38

Organism: scnpilot_dereplicated_Altererythrobacter_1

near complete RP 46 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: comp(32984..35029)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YMY4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 676.0
  • Bit_score: 1126
  • Evalue 0.0
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 684.0
  • Bit_score: 1145
  • Evalue 0.0
RNA polymerase primary sigma factor; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 83.5
  • Coverage: 686.0
  • Bit_score: 1088
  • Evalue 0.0

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Taxonomy

Kirrobacter mercurialis → Kirrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2046
TTGACGCAAGAGATCATGGCTTCGGACGACACCACCGGCACTGACGACGCACCGCTGATCGACCTCAACGAGGCGTCGGTGAAGAAGCTCATCGCCAAGGCGAAGCGCCGTGGCTACATCACCGTGGACGAGCTTAACGAAGCCCTGCCGCAGGACCAGATGTCCAGCGAGCAGATCGAGGATGTCATGTCCGCGATCTCGGAAATGGGCGTCAACATCGTCGAAACCGACGAAGACGCGGCCGAGGAAGACAGCGAGAACGAGGCCGAGGAACTGGCCGCCGCCGGAGACGAGGAATCGTCGGAAGGCGACATGTCCGGCCATGTCCCCGAAAAGAAGAAGAAGGAAACCACCGAGCGCACCGACGATCCGGTGCGGATGTACCTGCGCGAGATGGGCGCGGTGGAACTGCTCAGCCGCGAGGGCGAGATCGCCATCGCCAAGCGGATCGAGGCCGGCCGCGACACGATGATCATCGGCCTGTGCGAAAGCCCGATCACCTTCCACGCCATCATCCAGTGGTCCGAAGCGCTCAACGCGGGTGAGATGCAGCTGCGCGAGATCCTCGATCTCGACGCCATGCTCTCCAAGGAGCCGCCGGTCGACAAGATGGAGGACGGCGCCGAGGAAGACGACGACGACGGCGAGATCAGCGAGAAGACCGCCGGCCCTTCCTACAAGGAAGAGGAAGACGTCGAGGAGCACGAGGAAGAGAGCGACGAGGACGAGGACGGCGAGCCGCGCGCCCGCCGCCGCGAGGAGGAGGACGAGGAGGACAACACCCTGTCCCTCGCCCAGATGGAAGCGGCGCTGAAGCCCGAGGCGCTGGAACGCTTCGCCCGCATCACCGACCTGTTCAAGAAGTTCGAGAAGATCCAGGCGGAACGCGTGGACGTGCTGGGCCGGGGCGAGGATTTCCCCAAGGCCAAGGAAAAGAAATACGAGGACCTGCGCGAACAGCTCACCGCCGAGGTGGAGAGCGTGCAGTTCCACGCCACCAAGATCGAGTTCCTGGTGGACAACCTCTATGCCTTCAACCGCCGGCTGACCACGCTGGGCGGCCAGATGCTGCGCCTGGCGGAGCGCCATAAGGTCAAGCGCGCCGATTTCCTGGCCGAATACGTCGGGCACGAGCTTGACGAGGGCTGGCTCGCCTCCATGGCGAAGAAGGACAAGAAGTGGGCCGCCTTCGCCGAGAACGAAGCCGAGCCGGCCGAGCGCATCCGCGCCGAGATCGCCGACATCGCCGGCCAGACGGGCATGAGCCTCAATGAGTTCCGCCGGATCGTGAACATGGTCCAGAAGGGCGAGCGCGAGGCGCGCATCGCCAAGAAGGAGATGGTGGAGGCAAACCTGCGCCTGGTGATCTCCATCGCCAAGAAATACACCAATCGCGGGCTGCAATTCCTGGACCTGATCCAGGAAGGCAACATCGGCCTGATGAAGGCGGTCGACAAGTTCGAGTATCGCCGCGGCTACAAGTTCAGCACGTATGCCACCTGGTGGATCCGGCAGGCGATCACCCGCAGCATCGCCGATCAGGCGCGCACGATCCGCATCCCGGTGCACATGATCGAGACGATCAACAAGCTGGTGCGCACCAGCCGCCAGTTCCTGCACGAACAGGGCCGCGAGCCGACGCCGGAAGAAATGGCCGAGCGCCTTTCCATGCCGCTGGAGAAAGTGCGCAAGGTGATGAAGATCGCCAAGGAGCCGATCTCCCTCGAAACGCCGATCGGCGACGAGGAGGATTCGCACCTGGGCGATTTCATCGAGGACAAGAATGCGGTGATCCCGGTGGACGCGGCGATCCAGGCGAACCTCAAGGAAACCGTCACCCGCGTGCTGGCCAGCCTGACCCCGCGCGAGGAGCGCGTGCTGCGCATGCGCTTCGGCATCGGCATGAACACGGATCACACGCTGGAGGAAGTGGGGCAGCAGTTCTCGGTCACCCGCGAACGCATCCGGCAGATCGAGGCCAAGGCGCTGCGCAAGCTCAAACACCCCAGCCGCAGCCGCAAGATGCGCAGTTTCCTGGACCAGTAA
PROTEIN sequence
Length: 682
LTQEIMASDDTTGTDDAPLIDLNEASVKKLIAKAKRRGYITVDELNEALPQDQMSSEQIEDVMSAISEMGVNIVETDEDAAEEDSENEAEELAAAGDEESSEGDMSGHVPEKKKKETTERTDDPVRMYLREMGAVELLSREGEIAIAKRIEAGRDTMIIGLCESPITFHAIIQWSEALNAGEMQLREILDLDAMLSKEPPVDKMEDGAEEDDDDGEISEKTAGPSYKEEEDVEEHEEESDEDEDGEPRARRREEEDEEDNTLSLAQMEAALKPEALERFARITDLFKKFEKIQAERVDVLGRGEDFPKAKEKKYEDLREQLTAEVESVQFHATKIEFLVDNLYAFNRRLTTLGGQMLRLAERHKVKRADFLAEYVGHELDEGWLASMAKKDKKWAAFAENEAEPAERIRAEIADIAGQTGMSLNEFRRIVNMVQKGEREARIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLVRTSRQFLHEQGREPTPEEMAERLSMPLEKVRKVMKIAKEPISLETPIGDEEDSHLGDFIEDKNAVIPVDAAIQANLKETVTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKMRSFLDQ*