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SCNpilot_expt_1000_bf_scaffold_1173_curated_23

Organism: scnpilot_dereplicated_Altererythrobacter_1

near complete RP 46 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: comp(20285..20491)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B4AAD6 similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 68.0
  • Bit_score: 118
  • Evalue 2.20e-24
Cold-shock protein {ECO:0000313|EMBL:KHK93211.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 68.0
  • Bit_score: 119
  • Evalue 2.40e-24
cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 68.0
  • Bit_score: 114
  • Evalue 1.70e-23

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Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGCCGATCGGCACAGTAAAATTCTTCAATACCGACAAGGGTTATGGCTTCATCGCCCCGGAAGATGGCGGCGCGGACAGCTTCGTCCACATCTCCGCCGTGCAGGCCGCGGGCATGCAGACGCTGAACAAGGATCAGCGCGTGTCCTACGAAGTGGAACGCGGCCGTAACGGCAAGGAATCGGCGGTCAACCTCGCCCAGGCCTGA
PROTEIN sequence
Length: 69
MPIGTVKFFNTDKGYGFIAPEDGGADSFVHISAVQAAGMQTLNKDQRVSYEVERGRNGKESAVNLAQA*