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SCNpilot_expt_1000_bf_scaffold_358_curated_30

Organism: scnpilot_dereplicated_Altererythrobacter_1

near complete RP 46 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: 31109..31282

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X1G3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 57.0
  • Bit_score: 91
  • Evalue 2.40e-16
ECF-type sigma factor {ECO:0000313|EMBL:KHS45213.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 57.0
  • Bit_score: 92
  • Evalue 2.60e-16
rpoE; ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 57.0
  • Bit_score: 91
  • Evalue 1.30e-16

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 174
ATGGAAGCGATTGCTACGTTGCCGGCCACGCTCAAGGAGGTCTTGATCCTGCGGACGATAGAAGAGCGATCGGAAGCGGAGACGGCCGAAATCCTGGGCATCAGTCAAAAGGCCATCGAGACCCGGCTTTACCGCGCCAGGACGCGCCTCGCGGAAATTTTGAAAGAAATCTGA
PROTEIN sequence
Length: 58
MEAIATLPATLKEVLILRTIEERSEAETAEILGISQKAIETRLYRARTRLAEILKEI*