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SCNpilot_cont_1000_p_scaffold_1762_curated

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1762_curated_1
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3..533
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU24_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06726.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1762_curated_2
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1606..3054)
DNA (1449bp) protein (483aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000255|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000255|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000255|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01864}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=MIAB_AMOA5 rbh
(dimethylallyl)adenosine tRNA methylthiotransferase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA
SCNpilot_cont_1000_p_scaffold_1762_curated_3
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3118..3996)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=C3L3R0_AMOA5
hypothetical protein; K08974 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ACP20951.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1762_curated_4
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

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4304..4522
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7X6Q7_9BACT
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
SCNpilot_cont_1000_p_scaffold_1762_curated_5
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4501..4857
DNA (357bp) protein (119aa)
PilT protein domain protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1R9_9SPHI
PIN domain protein {ECO:0000313|EMBL:KHJ36991.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
SCNpilot_cont_1000_p_scaffold_1762_curated_6
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4995..5654)
DNA (660bp) protein (220aa)
Probable GTP-binding protein EngB n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=ENGB_AMOA5 rbh
hypothetical protein; K03978 GTP-binding protein
Probable GTP-binding protein EngB {ECO:0000255|HAMAP-Rule:MF_00321}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1762_curated_7
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5620..7152)
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ES14_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06016.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1762_curated_8
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7479..8966
DNA (1488bp) protein (496aa)
hypothetical protein; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16]
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Cysteine--tRNA ligase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ES15_AMOA5
SCNpilot_cont_1000_p_scaffold_1762_curated_9
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

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9139..11352
DNA (2214bp) protein (738aa)
Uncharacterized protein (Fragment) n=1 Tax=Strongylocentrotus purpuratus RepID=H3IZH9_STRPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESO83840.1}; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
SCNpilot_cont_1000_p_scaffold_1762_curated_10
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11458..12123)
DNA (666bp) protein (222aa)
hypothetical protein; K10773 endonuclease III [EC:4.2.99.18]
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Endonuclease III n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ES16_AMOA5
SCNpilot_cont_1000_p_scaffold_1762_curated_11
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12798..14228)
DNA (1431bp) protein (477aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU40_AMOA5
dnaA; chromosomal replication initiation protein; K02313 chromosomal replication initiator protein
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1762_curated_12
unknown

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comp(14511..14660)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1762_curated_13
Desulfovibrio aespoeensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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14840..16621
DNA (1782bp) protein (594aa)
Polypeptide-transport-associated domain protein ShlB-type n=1 Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VVK5_DESAO
polypeptide-transport-associated domain-containing protein
Polypeptide-transport-associated domain protein ShlB-type {ECO:0000313|EMBL:ADU63563.1}; TaxID=643562 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2).;"
SCNpilot_cont_1000_p_scaffold_1762_curated_14
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16758..18482
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU38_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06740.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1762_curated_15
unknown

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comp(18519..18692)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1762_curated_16
unknown

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18732..19121
DNA (390bp) protein (130aa)

This feature has no annotations

Displaying 16 items

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