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SCNpilot_cont_1000_p_scaffold_772_curated

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_772_curated_1
Cobetia marina, Cobetia, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..259)
DNA (258bp) protein (86aa)
Transposase of ISPca3, IS481 family n=2 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A2H4_PELCD
Transposase {ECO:0000313|EMBL:KGA01742.1}; TaxID=28258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Cobetia.;" source="Cobetia marina (Deleya marina).;"
integrase
SCNpilot_cont_1000_p_scaffold_772_curated_2
unknown

Not on your lists

comp(240..437)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_772_curated_3
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(592..1782)
DNA (1191bp) protein (397aa)
Leucine-rich-repeat protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46A62_METBF
Leucine-rich-repeat protein {ECO:0000313|EMBL:AAZ71230.1}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri (strain Fusaro / DSM 804).;"
GI24424 gene product from transcript GI24424-RA
SCNpilot_cont_1000_p_scaffold_772_curated_4
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2022..3581
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERK3_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05855.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_772_curated_5
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3687..4571)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TR56_MARTH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR22737.1}; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
SCNpilot_cont_1000_p_scaffold_772_curated_6
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


5227..8538
DNA (3312bp) protein (1104aa)
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5]
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Isoleucine--tRNA ligase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERJ7_AMOA5
SCNpilot_cont_1000_p_scaffold_772_curated_7
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8733..9140
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ES81_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06083.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_772_curated_8
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9337..10731)
DNA (1395bp) protein (465aa)
hypothetical protein; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Dihydrolipoyl dehydrogenase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERJ6_AMOA5
SCNpilot_cont_1000_p_scaffold_772_curated_9
unknown

Not on your lists

10753..10914
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_772_curated_10
unknown

Not on your lists

11011..11139
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_772_curated_11
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11354..13459
DNA (2106bp) protein (702aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERK9_AMOA5
hypothetical protein; K02238 competence protein ComEC
Uncharacterized protein {ECO:0000313|EMBL:ACE05861.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_772_curated_12
Rickettsiella grylli, Rickettsiella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13620..14516
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Rickettsiella grylli RepID=A8PQ66_9COXI
Uncharacterized protein {ECO:0000313|EMBL:EDP46713.1}; TaxID=59196 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Coxiellaceae; Rickettsiella.;" source="Rickettsiella grylli.;"
transposase YhgA family protein
SCNpilot_cont_1000_p_scaffold_772_curated_13
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14766..17672
DNA (2907bp) protein (969aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERL2_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05864.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_772_curated_14
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17956..19287
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERL5_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05867.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_772_curated_15
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19400..20044
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERL6_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05868.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_772_curated_16
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20105..22663
DNA (2559bp) protein (853aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERM3_AMOA5
Uncharacterized protein {ECO:0000313|EMBL:ACE05875.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
hypothetical protein; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC
SCNpilot_cont_1000_p_scaffold_772_curated_17
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22701..23384
DNA (684bp) protein (228aa)
gidB; 16S rRNA methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERM4_AMOA5
SCNpilot_cont_1000_p_scaffold_772_curated_18
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23516..25702
DNA (2187bp) protein (729aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERM5_AMOA5
Uncharacterized protein {ECO:0000313|EMBL:ACE05877.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_772_curated_19
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25809..27329
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERM6_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05878.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_772_curated_20
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27619..28935
DNA (1317bp) protein (439aa)
hypothetical protein; K11749 regulator of sigma E protease [EC:3.4.24.-]
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERM7_AMOA5
SCNpilot_cont_1000_p_scaffold_772_curated_21
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29025..31517
DNA (2493bp) protein (831aa)
hypothetical protein; K01338 ATP-dependent Lon protease [EC:3.4.21.53]
Lon protease {ECO:0000255|HAMAP-Rule:MF_01973}; EC=3.4.21.53 {ECO:0000255|HAMAP-Rule:MF_01973};; ATP-dependent protease La {ECO:0000255|HAMAP-Rule:MF_01973}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Lon protease n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=LON_AMOA5 rbh
SCNpilot_cont_1000_p_scaffold_772_curated_22
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

31527..32981
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERM9_AMOA5
hslU; ATP-dependent protease ATP-binding subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU
ATP-dependent protease ATPase subunit HslU {ECO:0000256|SAAS:SAAS00089650}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_772_curated_23
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

33018..34061
DNA (1044bp) protein (348aa)
Uncharacterized protein n=2 Tax=Myroides odoratimimus RepID=H1GJX6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHO10244.1}; TaxID=883150 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CCUG 10230.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_772_curated_24
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

34264..35049
DNA (786bp) protein (262aa)
hypothetical protein; K01776 glutamate racemase [EC:5.1.1.3]
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Glutamate racemase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERN1_AMOA5
SCNpilot_cont_1000_p_scaffold_772_curated_25
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(35249..35662)
DNA (414bp) protein (138aa)
hypothetical protein; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6]
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERN2_AMOA5
Uncharacterized protein {ECO:0000313|EMBL:ACE05884.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_772_curated_26
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(35695..36720)
DNA (1026bp) protein (342aa)
hypothetical protein; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase alpha subunit {ECO:0000255|HAMAP-Rule:MF_00281}; EC=6.1.1.20 {ECO:0000255|HAMAP-Rule:MF_00281};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000255|HAMAP-Rule:MF_00281}; Short=PheRS {ECO:0000255|HAMAP-Rule:MF_00281};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=SYFA_AMOA5 rbh
SCNpilot_cont_1000_p_scaffold_772_curated_27
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

36952..37506
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERN4_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05886.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_772_curated_28
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

37759..38766
DNA (1008bp) protein (336aa)
Leucine-rich repeat protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0D1_9CHLR
E3 ubiquitin-protein ligase SlrP {ECO:0000313|EMBL:CDZ81407.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_772_curated_29
unknown

Not on your lists

38796..38984
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_772_curated_30
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

39602..40927
DNA (1326bp) protein (442aa)
Uncharacterized protein n=2 Tax=Bacillus cereus RepID=J8CAE3_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EJR03149.1}; TaxID=1053219 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus MC67.;"
hypothetical protein
Displaying items 1-30 of 32 in total

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