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SCNpilot_cont_1000_p_scaffold_1111_curated

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1111_curated_1
unknown

Not on your lists

3..857
DNA (855bp) protein (285aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1111_curated_2
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1488..3557
DNA (2070bp) protein (690aa)
hypothetical protein; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3]
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETG7_AMOA5
Uncharacterized protein {ECO:0000313|EMBL:ACE06519.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1111_curated_3
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3544..4176
DNA (633bp) protein (211aa)
hypothetical protein; K03470 ribonuclease HII [EC:3.1.26.4]
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Ribonuclease HII n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETG6_AMOA5
SCNpilot_cont_1000_p_scaffold_1111_curated_4

Not on your lists

comp(4452..5594)
DNA (1143bp) protein (381aa)
Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G3D3_ABIDE id=97221 bin=ACD64 species=Abiotrophia defectiva genus=Abiotrophia taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD64 organism_group=TM6 organism_desc=unknown
Uncharacterized protein {ECO:0000313|EMBL:EKD48607.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Fic family protein
SCNpilot_cont_1000_p_scaffold_1111_curated_5
unknown

Not on your lists

5981..6280
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1111_curated_6
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6401..7720)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETG4_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06516.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1111_curated_7
Orientia tsutsugamushi, Orientia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7925..8599
DNA (675bp) protein (225aa)
RelA/SpoT-related protein n=1 Tax=Orientia tsutsugamushi (strain Ikeda) RepID=B3CSY3_ORITI
HD domain protein {ECO:0000313|EMBL:KJV71453.1}; TaxID=1359176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Orientia.;" source="Orientia tsutsugamushi str. TA763.;"
RelA/SpoT-related protein
SCNpilot_cont_1000_p_scaffold_1111_curated_8
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8725..10050)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETG4_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06516.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1111_curated_9
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10367..11641)
DNA (1275bp) protein (425aa)
hypothetical protein; K00951 GTP pyrophosphokinase [EC:2.7.6.5]
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETG3_AMOA5
Uncharacterized protein {ECO:0000313|EMBL:ACE06515.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1111_curated_10
unknown

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comp(11652..11741)
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1111_curated_11
unknown

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comp(11784..11948)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1111_curated_12
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12055..13437
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETG2_AMOA5
hypothetical protein; K03545 trigger factor
Uncharacterized protein {ECO:0000313|EMBL:ACE06514.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1111_curated_13
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13477..14148
DNA (672bp) protein (224aa)
hypothetical protein; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETG1_AMOA5
SCNpilot_cont_1000_p_scaffold_1111_curated_14
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14154..15359
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETG0_AMOA5
clpX; ATP-dependent protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|SAAS:SAAS00063387}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1111_curated_15
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15393..15824)
DNA (432bp) protein (144aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GC72_GEOUR
activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ABQ24815.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
SCNpilot_cont_1000_p_scaffold_1111_curated_16
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15917..17242)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETG4_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06516.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1111_curated_17
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17482..19068
DNA (1587bp) protein (529aa)
lysS; lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Lysine--tRNA ligase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETL3_AMOA5
SCNpilot_cont_1000_p_scaffold_1111_curated_18
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19421..20968
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETL6_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06568.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1111_curated_19
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21302..22048
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETL7_AMOA5
hypothetical protein; K03589 cell division protein FtsQ
Uncharacterized protein {ECO:0000313|EMBL:ACE06569.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1111_curated_20
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22052..23362
DNA (1311bp) protein (437aa)
Cell division protein ftsA n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETL8_AMOA5
hypothetical protein; K03590 cell division protein FtsA
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1111_curated_21
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23381..24835
DNA (1455bp) protein (485aa)
Cell division protein FtsZ n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETL9_AMOA5
hypothetical protein; K03531 cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1111_curated_22
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25101..26156)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETM4_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06576.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1111_curated_23
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26466..26750)
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ESQ0_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06297.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1111_curated_24
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26743..27450)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ESU5_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06297.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1111_curated_25
Chaetomium globosum, Chaetomium, Sordariales, Sordariomycetidae, Ascomycota, Fungi

Not on your lists

comp(27602..28366)
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) RepID=Q2H8Z2_CHAGB
Putative uncharacterized protein {ECO:0000313|EMBL:EAQ91377.1}; TaxID=306901 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Chaetomium.;" source="Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC; 6347 / NRRL 1970) (Soil fungus).;"
hypothetical protein
Displaying 25 items

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