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SCNpilot_expt_500_bf_scaffold_168_curated

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_168_curated_1
unknown

Not on your lists

36..257
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_168_curated_2
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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431..1126
DNA (696bp) protein (232aa)
GCN5 family acetyltransferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6FFCE
Uncharacterized protein {ECO:0000313|EMBL:KFN44880.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
putative acyltransferase
SCNpilot_expt_500_bf_scaffold_168_curated_3
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1137..1847
DNA (711bp) protein (237aa)
Putative esterase n=1 Tax=Flavobacterium sp. CF136 RepID=J3C208_9FLAO
Putative esterase {ECO:0000313|EMBL:EJL62711.1}; Flags: Precursor;; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
alpha/beta hydrolase fold protein
SCNpilot_expt_500_bf_scaffold_168_curated_4
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

1991..4291
DNA (2301bp) protein (767aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU000675}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU000675};; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
beta-galactosidase (EC:3.2.1.23); K12308 beta-galactosidase [EC:3.2.1.23]
Beta-galactosidase n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UM60_AKKM8
SCNpilot_expt_500_bf_scaffold_168_curated_5
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4288..7089)
DNA (2802bp) protein (934aa)
alpha-L-rhamnosidase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B3453D
alpha-L-rhamnosidase
Alpha-L-rhamnosidase {ECO:0000313|EMBL:ADZ78879.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_expt_500_bf_scaffold_168_curated_6
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

7177..9072
DNA (1896bp) protein (632aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4E669
Uncharacterized protein {ECO:0000313|EMBL:AIE87629.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein; K09955 hypothetical protein
SCNpilot_expt_500_bf_scaffold_168_curated_7
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

9090..9374
DNA (285bp) protein (95aa)
Nitrogen-fixing NifU domain protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RA56_SPISS
Nitrogen-fixing NifU {ECO:0000313|EMBL:AIE87630.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
nitrogen-fixing NifU domain-containing protein
SCNpilot_expt_500_bf_scaffold_168_curated_8
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(9371..9919)
DNA (549bp) protein (183aa)
Uncharacterized protein {ECO:0000313|EMBL:AIE87631.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_168_curated_9
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(9931..10944)
DNA (1014bp) protein (338aa)
Rod shape-determining protein MreB n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EXE4_9BACT
Rod shape-determining protein MreB {ECO:0000313|EMBL:AIE87632.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
rod shape-determining protein MreB
SCNpilot_expt_500_bf_scaffold_168_curated_10
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(10941..12233)
DNA (1293bp) protein (431aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8EAQ6_9FIRM
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
SCNpilot_expt_500_bf_scaffold_168_curated_11
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(12446..12985)
DNA (540bp) protein (180aa)
Restriction endonuclease n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EUY7_9BACT
HNH endonuclease family protein {ECO:0000313|EMBL:AIE87634.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Restriction endonuclease
SCNpilot_expt_500_bf_scaffold_168_curated_12
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13344..14213
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000366FCD0
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CCK74389.1}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;" source="Oleispira antarctica RB-8.;"
methyl-accepting chemotaxis protein
SCNpilot_expt_500_bf_scaffold_168_curated_13
Thermoanaerobacterium saccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

14173..15054
DNA (882bp) protein (294aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VRM0_THESW
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AFK85165.1}; TaxID=1094508 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485).;"
SCNpilot_expt_500_bf_scaffold_168_curated_14
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15056..15646
DNA (591bp) protein (197aa)
Thiol-disulfide isomerase-like thioredoxin n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AIK7_FLELS
thiol-disulfide isomerase-like thioredoxin
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:AFM03792.1}; Flags: Precursor;; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 /; NCIMB 1366 / Sio-4).;"
SCNpilot_expt_500_bf_scaffold_168_curated_15
Cyanothece sp. CCY0110, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(15643..16335)
DNA (693bp) protein (231aa)
Short chain dehydrogenase {ECO:0000313|EMBL:EAZ92221.1}; EC=1.1.1.- {ECO:0000313|EMBL:EAZ92221.1};; TaxID=391612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. CCY0110.;"
Short chain dehydrogenase n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IMW8_9CHRO
short-chain alcohol dehydrogenase
SCNpilot_expt_500_bf_scaffold_168_curated_16
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(16332..17168)
DNA (837bp) protein (279aa)
putative 6-pyruvoyl tetrahydropterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12]
Putative uncharacterized protein n=2 Tax=Chloroflexus RepID=A9WIW9_CHLAA
Putative 6-pyruvoyl tetrahydropterin synthase {ECO:0000313|EMBL:AIE87639.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_168_curated_17
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(17165..18034)
DNA (870bp) protein (290aa)
Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3I7_GEMAT
Sugar ABC transporter permease protein {ECO:0000313|EMBL:AIE87640.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
putative ABC transporter permease protein; K02057 simple sugar transport system permease protein
SCNpilot_expt_500_bf_scaffold_168_curated_18
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(18039..18725)
DNA (687bp) protein (229aa)
Nucleoside ABC transporter membrane protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EUD4_9BACT
ABC transporter, permease protein {ECO:0000313|EMBL:AIE87641.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
nucleoside ABC transporter membrane protein
SCNpilot_expt_500_bf_scaffold_168_curated_19
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(19065..20519)
DNA (1455bp) protein (485aa)
nucleoside ABC transporter ATP-binding protein (EC:3.6.3.17)
Nucleoside ABC transporter ATP-binding protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EW92_9BACT
ABC transporter-like protein {ECO:0000313|EMBL:AIE87642.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_168_curated_20
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(20524..21528)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000376B44C
Putative lipoprotein {ECO:0000313|EMBL:AIE87652.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
nucleoside-binding protein
SCNpilot_expt_500_bf_scaffold_168_curated_21
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(21583..22470)
DNA (888bp) protein (296aa)
Uncharacterized protein {ECO:0000313|EMBL:AIE88010.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_168_curated_22
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(22549..23862)
DNA (1314bp) protein (438aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]
Serine hydroxymethyltransferase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=GLYA_ROSCS rbh
SCNpilot_expt_500_bf_scaffold_168_curated_23
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24103..24984
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000364D876
metal dependent phosphohydrolase
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:ADZ25619.1}; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
SCNpilot_expt_500_bf_scaffold_168_curated_24
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists


comp(25037..25294)
DNA (258bp) protein (86aa)
50S ribosomal protein L31 {ECO:0000256|RuleBase:RU000564}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
ribosomal protein L31; K02909 large subunit ribosomal protein L31 id=68281 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
rpmE; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31
SCNpilot_expt_500_bf_scaffold_168_curated_25
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25468..26322
DNA (855bp) protein (285aa)
histidine kinase n=1 Tax=Pseudomonas sp. 313 RepID=UPI0002F78955
putative signal transduction protein
Putative signal transduction protein {ECO:0000313|EMBL:AEV26540.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_500_bf_scaffold_168_curated_26
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

26430..29144
DNA (2715bp) protein (905aa)
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CCW35401.1}; EC=2.7.9.1 {ECO:0000313|EMBL:CCW35401.1};; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
Pyruvate phosphate dikinase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EVF6_9BACT
SCNpilot_expt_500_bf_scaffold_168_curated_27
Streptomyces sp. SirexAA-E, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29355..29780)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Streptomyces sp. ScaeMP-e10 RepID=UPI0003731970
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN08655.1}; TaxID=862751 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SirexAA-E / ActE).;"
SCNpilot_expt_500_bf_scaffold_168_curated_28
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

30115..30957
DNA (843bp) protein (281aa)
Putative amidohydrolase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DN60_SINAD
Putative amidohydrolase {ECO:0000313|EMBL:AIE86904.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
amidohydrolase
SCNpilot_expt_500_bf_scaffold_168_curated_29
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

31032..32246
DNA (1215bp) protein (405aa)
peptidase n=1 Tax=Brevibacillus brevis RepID=UPI00037F76EC
Uncharacterized protein {ECO:0000313|EMBL:AIE84355.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
yuxL; peptidase
SCNpilot_expt_500_bf_scaffold_168_curated_30
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(32305..33405)
DNA (1101bp) protein (367aa)
Cyclic dehypoxanthine futalosine synthase {ECO:0000256|HAMAP-Rule:MF_00992}; Short=Cyclic DHFL synthase {ECO:0000256|HAMAP-Rule:MF_00992};; EC=1.21.98.1 {ECO:0000256|HAMAP-Rule:MF_00992};; Dehypoxanthine futalosine cyclase {ECO:0000256|HAMAP-Rule:MF_00992}; Menaquinone biosynthetic enzyme MqnC {ECO:0000256|HAMAP-Rule:MF_00992}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
De-hypoxanthine futalosine cyclase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EYU4_9BACT
de-hypoxanthine futalosine cyclase
Displaying items 1-30 of 103 in total

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