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SCNpilot_expt_500_bf_scaffold_157_curated

Search features with annotation key words

Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_157_curated_1
unknown

Not on your lists

1..399
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_157_curated_2
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(396..2129)
DNA (1734bp) protein (578aa)
hypothetical protein n=1 Tax=Rhodococcus sp. DK17 RepID=UPI0002DF6F91
SARP family transcriptional regulator
Tax=RBG_16_RIF_CHLX_72_14_curated
SCNpilot_expt_500_bf_scaffold_157_curated_3
unknown

Not on your lists

comp(2306..2491)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_157_curated_4
unknown

Not on your lists

comp(2502..2786)
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_157_curated_5
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(2786..3580)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI0003656393
Uncharacterized protein {ECO:0000313|EMBL:AIE86360.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
prepilin-type N-terminal cleavage/methylation domain
SCNpilot_expt_500_bf_scaffold_157_curated_6
unknown

Not on your lists

comp(3703..3954)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_157_curated_7
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

4496..4990
DNA (495bp) protein (165aa)
DinB family protein n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PPH4_MEIRD
DinB family protein {ECO:0000313|EMBL:AIE86010.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
DinB family protein
SCNpilot_expt_500_bf_scaffold_157_curated_8
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4994..6325)
DNA (1332bp) protein (444aa)
Peptidase M28 n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GSF3_9BACT
Peptidase M28 {ECO:0000313|EMBL:CCH56832.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
peptidase M28
SCNpilot_expt_500_bf_scaffold_157_curated_9
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

6563..8005
DNA (1443bp) protein (481aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EUC7_9BACT
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:AIE86924.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
response regulator receiver modulated diguanylate cyclase
SCNpilot_expt_500_bf_scaffold_157_curated_10
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

8048..9955
DNA (1908bp) protein (636aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI000380D5BD
Uncharacterized protein {ECO:0000313|EMBL:AIE85969.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_157_curated_11
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(9985..10998)
DNA (1014bp) protein (338aa)
Copper amine oxidase N-terminal domain n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ET86_9BACT
Copper amine oxidase N-terminal domain
Tax=CG_Arma_02
SCNpilot_expt_500_bf_scaffold_157_curated_12
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(11155..12354)
DNA (1200bp) protein (400aa)
transcriptional repressor n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4534
Transcriptional repressor of the xylose operon {ECO:0000313|EMBL:AIE84653.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
transcriptional regulator/sugar kinase
SCNpilot_expt_500_bf_scaffold_157_curated_13
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

12644..13477
DNA (834bp) protein (278aa)
Prepilin-type N-terminal cleavage/methylation domain n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ESX3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIE84652.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
prepilin-type N-terminal cleavage/methylation domain
SCNpilot_expt_500_bf_scaffold_157_curated_14
unknown

Not on your lists

13482..13673
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_157_curated_15
Lysinibacillus manganicus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13740..14261)
DNA (522bp) protein (174aa)
N-acetyltransferase GCN5 n=1 Tax=Paenibacillus alvei A6-6i-x RepID=S9SXP2_PAEAL
Acetyltransferase {ECO:0000313|EMBL:KGR74323.1}; TaxID=1384049 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus manganicus DSM 26584.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_157_curated_16
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14336..14863
DNA (528bp) protein (176aa)
ogt; methylated-DNA--protein-cysteine methyltransferase (EC:2.1.1.63); K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:AAU93222.1}; EC=2.1.1.63 {ECO:0000313|EMBL:AAU93222.1};; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI000363B978
SCNpilot_expt_500_bf_scaffold_157_curated_17
GWF2_TM6_32_72, TM6, Bacteria

Not on your lists

comp(14860..15591)
DNA (732bp) protein (244aa)
streptomycin-6-phosphotransferase n=1 Tax=Holospora undulata RepID=UPI00033118DB
Uncharacterized protein {ECO:0000313|EMBL:KKP35849.1}; TaxID=1619079 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium GW2011_GWF2_32_72.;"
streptomycin-6-phosphotransferase
SCNpilot_expt_500_bf_scaffold_157_curated_18
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

15679..16170
DNA (492bp) protein (164aa)
Thiol-disulfide isomerase/thioredoxin domain protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AG41_IGNAJ
Thiol-disulfide isomerase/thioredoxin domain protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
SCNpilot_expt_500_bf_scaffold_157_curated_19
unknown

Not on your lists

16180..16464
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_157_curated_20
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16598..16837
DNA (240bp) protein (80aa)
Acetyltransferase n=1 Tax=Streptomyces gancidicus BKS 13-15 RepID=M3DE31_9ACTO
Acetyltransferase {ECO:0000313|EMBL:EMF28190.1}; TaxID=1284664 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gancidicus BKS 13-15.;"
SCNpilot_expt_500_bf_scaffold_157_curated_21
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16984..18288
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SNP3_9BACL
Membrane protein {ECO:0000313|EMBL:KJS13779.1}; TaxID=1629715 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.;"
CBS domain-containing protein
SCNpilot_expt_500_bf_scaffold_157_curated_22
unknown

Not on your lists

18293..18745
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_157_curated_23
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(18739..21582)
DNA (2844bp) protein (948aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=583355 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193; / KCTC 12865).;"
ribonucleoside-diphosphate reductase subunit alpha; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EJ98_CORAD
SCNpilot_expt_500_bf_scaffold_157_curated_24
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(21600..22685)
DNA (1086bp) protein (362aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
ribonucleoside-diphosphate reductase (EC:1.17.4.1); K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
response regulator SirA, partial n=2 Tax=unclassified Verrucomicrobia (miscellaneous) RepID=UPI0003821B96
SCNpilot_expt_500_bf_scaffold_157_curated_25
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

23013..23555
DNA (543bp) protein (181aa)
Uncharacterized protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GXV1_CAUCN
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
SCNpilot_expt_500_bf_scaffold_157_curated_26
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists

23586..24182
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI0003781269
hypothetical protein
Tax=RBG_16_Chloroflexi_54_11_curated
SCNpilot_expt_500_bf_scaffold_157_curated_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24179..24979)
DNA (801bp) protein (267aa)
Sulphatase-modifying factor protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPI5_NIAKG
sulfatase-modifying factor protein
Sulphatase-modifying factor protein {ECO:0000313|EMBL:AEV97806.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_bf_scaffold_157_curated_28
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24980..25717)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PGJ5_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU61700.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_157_curated_29
unknown

Not on your lists

25882..26847
DNA (966bp) protein (322aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_157_curated_30
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

27200..27778
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Rhodopirellula baltica SH28 RepID=K5CWT0_RHOBT
Uncharacterized protein {ECO:0000313|EMBL:AIE86832.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Displaying items 1-30 of 104 in total

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