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SCNpilot_expt_500_bf_scaffold_412_curated

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_412_curated_1
unknown

Not on your lists

531..1763
DNA (1233bp) protein (411aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_412_curated_2
unknown

Not on your lists

1760..2137
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_412_curated_3
unknown

Not on your lists

2175..2768
DNA (594bp) protein (198aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_412_curated_4
unknown

Not on your lists

2771..3184
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_412_curated_5
unknown

Not on your lists

3321..3914
DNA (594bp) protein (198aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_412_curated_6
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(3899..4882)
DNA (984bp) protein (328aa)
oxidoreductase (EC:1.-.-.-)
Probable oxidoreductase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FLG6_SORC5
Putative oxidoreductase {ECO:0000313|EMBL:AIE86547.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_412_curated_7
unknown

Not on your lists

comp(5063..5314)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_412_curated_8
unknown

Not on your lists

5855..6409
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_412_curated_9
unknown

Not on your lists

6437..7180
DNA (744bp) protein (248aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_412_curated_10
unknown

Not on your lists

7223..7825
DNA (603bp) protein (201aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_412_curated_11
unknown

Not on your lists

7859..8458
DNA (600bp) protein (200aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_412_curated_12
unknown

Not on your lists

8499..8909
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_412_curated_13
unknown

Not on your lists

8906..9490
DNA (585bp) protein (195aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_412_curated_14
unknown

Not on your lists

9495..10103
DNA (609bp) protein (203aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_412_curated_15
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10265..10996
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K3C1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG98624.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_expt_500_bf_scaffold_412_curated_16
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

11111..12646
DNA (1536bp) protein (512aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWP4_SORCE
Glycoside hydrolase {ECO:0000313|EMBL:AIE84062.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_412_curated_17
unknown

Not on your lists

12964..13395
DNA (432bp) protein (144aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_412_curated_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13352..13921)
DNA (570bp) protein (190aa)
molybdenum cofactor cytidylyltransferase; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
Molybdenum cofactor cytidylyltransferase n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0K0H0_ARTS2
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_expt_500_bf_scaffold_412_curated_19
unknown

Not on your lists

comp(13931..14413)
DNA (483bp) protein (161aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_412_curated_20
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(14524..15036)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI00037990D9
prepilin-type N-terminal cleavage/methylation domain
Prepilin-type N-terminal cleavage/methylation domain {ECO:0000313|EMBL:CCW35853.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
SCNpilot_expt_500_bf_scaffold_412_curated_21
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(15112..16095)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHB4_THET1
hypothetical protein; K07402 xanthine dehydrogenase accessory factor
Uncharacterized protein {ECO:0000313|EMBL:ACZ43135.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_expt_500_bf_scaffold_412_curated_22
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(16135..18207)
DNA (2073bp) protein (691aa)
aldehyde dehydrogenase (EC:1.2.99.3); K07303 isoquinoline 1-oxidoreductase, beta subunit [EC:1.3.99.16]
Aldehyde dehydrogenase (Pyrroloquinoline-quinone) n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEP1_RHOMR
Molybdopterin-binding xanthine dehydrogenase {ECO:0000313|EMBL:AIE84300.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_412_curated_23
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(18204..18665)
DNA (462bp) protein (154aa)
isoquinoline 1-oxidoreductase subunit alpha; K07302 isoquinoline 1-oxidoreductase, alpha subunit [EC:1.3.99.16]
(2Fe-2S)-binding protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035EEDE5
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:AIE84301.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_412_curated_24
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18766..20541)
DNA (1776bp) protein (592aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003639260
Uncharacterized protein {ECO:0000313|EMBL:EJZ62043.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_412_curated_25

Not on your lists

comp(20604..22124)
DNA (1521bp) protein (507aa)
Sulfatase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEU0_THET1
Uncharacterized protein {ECO:0000313|EMBL:KKN70320.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sulfatase
SCNpilot_expt_500_bf_scaffold_412_curated_26
unknown

Not on your lists

22211..23350
DNA (1140bp) protein (380aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_412_curated_27
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

23588..26314
DNA (2727bp) protein (909aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2JAQ5_NOSP7
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AIE84218.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)
SCNpilot_expt_500_bf_scaffold_412_curated_28
unknown

Not on your lists

comp(26318..26857)
DNA (540bp) protein (180aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_412_curated_29
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(26850..27944)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Prochlorothrix hollandica RepID=UPI000345D7DD
ATPase-like {ECO:0000313|EMBL:CBN55839.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
ATPase-like protein
SCNpilot_expt_500_bf_scaffold_412_curated_30
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

comp(27987..30050)
DNA (2064bp) protein (688aa)
histidine kinase n=1 Tax=Desulfovibrio longus RepID=UPI0003B42A4B
PAS/PAC sensor signal transduction histidine kinase
Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
Displaying items 1-30 of 33 in total

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