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SCNpilot_expt_500_bf_scaffold_111_curated

Search features with annotation key words

Displaying items 1-30 of 338 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_111_curated_1
unknown

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519..1271
DNA (753bp) protein (251aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_111_curated_2
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(1268..1681)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036ECD25
transcriptional regulator, AraC family
Tax=RBG_16_Elusimicrobia_66_12_curated
SCNpilot_expt_500_bf_scaffold_111_curated_3
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(1671..3593)
DNA (1923bp) protein (641aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ETK3_9BACT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
glucose-inhibited division protein A
SCNpilot_expt_500_bf_scaffold_111_curated_4
unknown

Not on your lists

3628..3852
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_111_curated_5
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(3899..4345)
DNA (447bp) protein (149aa)
Putative GAF sensor protein n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VY68_THESW
Putative GAF sensor protein {ECO:0000313|EMBL:AIE87198.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
putative GAF sensor protein
SCNpilot_expt_500_bf_scaffold_111_curated_6
Bacillus okhensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4610..5554
DNA (945bp) protein (315aa)
Inorganic anion transporter, sulfate permease (SulP) family n=1 Tax=Bacillus megaterium (strain ATCC 12872 / QMB1551) RepID=D5E4A7_BACMQ
Sulfate transporter {ECO:0000313|EMBL:KHF40914.1}; TaxID=333138 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus okhensis.;"
inorganic anion transporter, sulfate permease (SulP) family
SCNpilot_expt_500_bf_scaffold_111_curated_7
Cyanothece sp. CCY0110, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

5564..6082
DNA (519bp) protein (173aa)
Sulfate permease protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IQ56_9CHRO
sulfate transporter
Sulfate permease protein {ECO:0000313|EMBL:EAZ91396.1}; TaxID=391612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. CCY0110.;"
SCNpilot_expt_500_bf_scaffold_111_curated_8
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6109..6480
DNA (372bp) protein (124aa)
molybdopterin synthase subunit MoaE; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-]
Molybdopterin synthase subunit MoaE n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R2S3_ISOPI
Molybdopterin synthase subunit MoaE {ECO:0000313|EMBL:ADV63570.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCNpilot_expt_500_bf_scaffold_111_curated_9
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6740..7714)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00030B0D48
transglutaminase domain-containing protein
Transglutaminase domain protein {ECO:0000313|EMBL:ADG11059.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_expt_500_bf_scaffold_111_curated_10
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(7717..8679)
DNA (963bp) protein (321aa)
Uncharacterized protein n=2 Tax=unclassified Opitutaceae RepID=I6B2B1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EIQ01403.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_111_curated_11
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(8676..10112)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBE9_9BACT
Protein containing domains DUF404, DUF407 {ECO:0000313|EMBL:AIE84818.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_111_curated_12
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10340..11110
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000371D8B2
Helix-turn-helix domain protein {ECO:0000313|EMBL:GAO01753.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
helix-turn-helix domain-containing protein
SCNpilot_expt_500_bf_scaffold_111_curated_13
unknown

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11274..11585
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_111_curated_14
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

11712..12842
DNA (1131bp) protein (377aa)
Uncharacterized protein {ECO:0000313|EMBL:AIE88026.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein
Uncharacterized protein id=1249678 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
SCNpilot_expt_500_bf_scaffold_111_curated_15
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

13007..13723
DNA (717bp) protein (239aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EYI7_9BACT
Winged helix family two component transcriptional regulator {ECO:0000313|EMBL:AIE86548.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
SCNpilot_expt_500_bf_scaffold_111_curated_16
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

13781..14767
DNA (987bp) protein (329aa)
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000256|HAMAP-Rule:MF_01685};; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
thioredoxin reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Ferredoxin--NADP reductase 2 n=1 Tax=Bacillus clausii (strain KSM-K16) RepID=FENR2_BACSK rbh
SCNpilot_expt_500_bf_scaffold_111_curated_17
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

14864..15778
DNA (915bp) protein (305aa)
Putative lipid kinase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8ML71_CORCM
Putative lipid kinase {ECO:0000313|EMBL:AIE86549.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
yegS1; putative lipid kinase; K07029
SCNpilot_expt_500_bf_scaffold_111_curated_18
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

15869..16594
DNA (726bp) protein (242aa)
glutamine amidotransferase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000289C86B
Glutamine amidotransferase, class I {ECO:0000313|EMBL:AIE86215.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Predicted glutamine amidotransferases
SCNpilot_expt_500_bf_scaffold_111_curated_19
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

16591..17040
DNA (450bp) protein (150aa)
methylcrotonoyl-CoA carboxylase (EC:6.4.1.4); K01968 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
3-methylcrotonyl-CoA carboxylase subunit alpha n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0IFF4_9SPHN
Geranyl-CoA carboxylase biotin-containing subunit {ECO:0000313|EMBL:AIE86216.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_111_curated_20
unknown

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17072..17431
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_111_curated_21
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

17428..18336
DNA (909bp) protein (303aa)
pyruvate carboxyltransferase; K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
Pyruvate carboxyltransferase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TPH6_9CHLR
Pyruvate carboxyltransferase {ECO:0000313|EMBL:AIE86217.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_111_curated_22

Not on your lists

comp(18188..19174)
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=uncultured prokaryote RepID=H5SN77_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:BAL57613.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
SCNpilot_expt_500_bf_scaffold_111_curated_23
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(19143..20354)
DNA (1212bp) protein (404aa)
1,2-diacylglycerol 3-glucosyltransferase (EC:2.4.1.157)
1,2-diacylglycerol 3-glucosyltransferase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZ56_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:AIE86218.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_111_curated_24
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(20462..21025)
DNA (564bp) protein (188aa)
Helix-turn-helix domain n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZQ3_9BACT
DNA binding domain-containing protein {ECO:0000313|EMBL:AIE86172.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Helix-turn-helix domain
SCNpilot_expt_500_bf_scaffold_111_curated_25
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(21117..22130)
DNA (1014bp) protein (338aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9A4_9FIRM
SCNpilot_expt_500_bf_scaffold_111_curated_26
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(22118..22822)
DNA (705bp) protein (235aa)
Haloacid dehalogenase superfamily enzyme, subfamily IA,REG-2-like HAD hydrolase, subfamily IA n=1 Tax=Gloeocapsa sp. PCC 73106 RepID=L8LNB3_9CHRO
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:AIE86174.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
HAD-superfamily hydrolase
SCNpilot_expt_500_bf_scaffold_111_curated_27
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

22969..23673
DNA (705bp) protein (235aa)
Uncharacterized protein {ECO:0000313|EMBL:AIE86175.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_111_curated_28
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

23750..24427
DNA (678bp) protein (226aa)
Uncharacterized protein {ECO:0000313|EMBL:AIE87293.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_111_curated_29
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(24424..25038)
DNA (615bp) protein (205aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
thymidine kinase (EC:2.7.1.21); K00857 thymidine kinase [EC:2.7.1.21]
Thymidine kinase n=1 Tax=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) RepID=E6TXD2_BACCJ
SCNpilot_expt_500_bf_scaffold_111_curated_30
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

25057..25386
DNA (330bp) protein (110aa)
Putative regulatory protein, FmdB family n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EUV2_9BACT
Cytochrome c family protein, putative {ECO:0000313|EMBL:AIE86178.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
putative regulatory protein, FmdB family
Displaying items 1-30 of 338 in total

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