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SCNpilot_expt_500_bf_scaffold_12_curated

Search features with annotation key words

Displaying items 1-30 of 910 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_12_curated_1
unknown

Not on your lists

comp(1..144)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_12_curated_2
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

402..1286
DNA (885bp) protein (295aa)
ABC transporter permease n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026286CC
Putative permease protein {ECO:0000313|EMBL:AIE84787.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
binding-protein-dependent transport system inner membrane protein; K02025 multiple sugar transport system permease protein
SCNpilot_expt_500_bf_scaffold_12_curated_3
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

1283..2116
DNA (834bp) protein (278aa)
Putative Transmembrane protein n=1 Tax=Streptomyces viridochromogenes Tue57 RepID=L8PLC9_STRVR
N-Acetyl-D-glucosamine ABC transport system, permease protein 2 {ECO:0000313|EMBL:AIE84788.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
binding-protein-dependent transport systems inner membrane component
SCNpilot_expt_500_bf_scaffold_12_curated_4
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(2113..3036)
DNA (924bp) protein (308aa)
pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B3345D
Uncharacterized protein {ECO:0000313|EMBL:KIJ72825.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
SCNpilot_expt_500_bf_scaffold_12_curated_5
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

3172..3969
DNA (798bp) protein (266aa)
xylose isomerase domain-containing protein; K03082 hexulose-6-phosphate isomerase [EC:5.-.-.-]
Xylose isomerase n=1 Tax=Brachyspira hampsonii 30446 RepID=L0WZT4_9SPIR
Xylose isomerase {ECO:0000313|EMBL:AIE85957.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_12_curated_6
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

3966..5105
DNA (1140bp) protein (380aa)
oxidoreductase n=1 Tax=Streptomyces RepID=UPI0001FFF8EF
Oxidoreductase with transcriptional repressor domain {ECO:0000313|EMBL:AIE84668.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
oxidoreductase domain-containing protein
SCNpilot_expt_500_bf_scaffold_12_curated_7
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

Not on your lists

5169..6437
DNA (1269bp) protein (423aa)
Xaa-Pro dipeptidase (EC:3.4.13.9); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
Xaa-Pro dipeptidase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A022_OPITP
Tax=GWF2_Elusimicrobia_62_30_curated
SCNpilot_expt_500_bf_scaffold_12_curated_8
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(6439..7890)
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036A859D
Uncharacterized protein {ECO:0000313|EMBL:AIE86098.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_12_curated_9
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(7902..11237)
DNA (3336bp) protein (1112aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036FD917
Uncharacterized protein {ECO:0000313|EMBL:AIE86097.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_12_curated_10
Mucinivorans hirudinis, Mucinivorans, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11323..14232)
DNA (2910bp) protein (970aa)
Beta-galactosidase {ECO:0000313|EMBL:CDN31274.1}; EC=3.2.1.23 {ECO:0000313|EMBL:CDN31274.1};; Flags: Precursor;; TaxID=1433126 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Mucinivorans.;" source="Mucinivorans hirudinis.;"
bgl2A; beta-galactosidase (EC:3.2.1.23); K01190 beta-galactosidase [EC:3.2.1.23]
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Bacteroides coprophilus DSM 18228 = JCM 13818 RepID=S0FDC9_9BACE
SCNpilot_expt_500_bf_scaffold_12_curated_11
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

14281..16065
DNA (1785bp) protein (595aa)
glycosyl hydrolase family protein; K01190 beta-galactosidase [EC:3.2.1.23]
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI00037D0D0B
Tax=RBG_13_Aminicenantes_63_10_curated
SCNpilot_expt_500_bf_scaffold_12_curated_12
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

16087..17097
DNA (1011bp) protein (337aa)
beta-galactosidase (EC:3.2.1.23); K01190 beta-galactosidase [EC:3.2.1.23]
beta-galactosidase n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237D5D4
Glycoside hydrolase family protein {ECO:0000313|EMBL:AIE83675.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_12_curated_13
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17094..18269)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037189A7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAL85056.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
SCNpilot_expt_500_bf_scaffold_12_curated_14
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(18238..22704)
DNA (4467bp) protein (1489aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LMG5_SYNFM
multi-sensor hybrid histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
SCNpilot_expt_500_bf_scaffold_12_curated_15
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(22846..24297)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BFH1_9GAMM
Membrane protein {ECO:0000313|EMBL:AIE84360.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_12_curated_16
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(24276..28616)
DNA (4341bp) protein (1447aa)
glycosyl hydrolases 38-like; K01191 alpha-mannosidase [EC:3.2.1.24]
Glycosyl hydrolases 38-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILX7_KORVE
Alpha-mannosidase {ECO:0000313|EMBL:AIE84359.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_12_curated_17
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(28775..30928)
DNA (2154bp) protein (718aa)
Aminopeptidase N n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPJ1_SINAD
Peptidase M1 membrane alanine aminopeptidase {ECO:0000313|EMBL:AIE85945.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
aminopeptidase N
SCNpilot_expt_500_bf_scaffold_12_curated_18
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31006..32190
DNA (1185bp) protein (395aa)
Beta-lactamase class C and other penicillin binding proteins n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZK9_9BACT
Beta-lactamase class C and other penicillin binding proteins
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
SCNpilot_expt_500_bf_scaffold_12_curated_19
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(32105..33724)
DNA (1620bp) protein (540aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9); K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM
glucose-6-phosphate isomerase n=1 Tax=Zavarzinella formosa RepID=UPI0003194927
SCNpilot_expt_500_bf_scaffold_12_curated_20
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33772..34377)
DNA (606bp) protein (202aa)
Putative hydrolase n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XQV6_DESMR
hydrolase; K07025 putative hydrolase of the HAD superfamily
Putative hydrolase {ECO:0000313|EMBL:BAH77919.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
SCNpilot_expt_500_bf_scaffold_12_curated_21
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(34374..34835)
DNA (462bp) protein (154aa)
rpiB; ribose-5-phosphate isomerase B (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6]
Ribose 5-phosphate isomerase B n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08ZP8_STIAD
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:GAN34667.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
SCNpilot_expt_500_bf_scaffold_12_curated_22
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

35011..36108
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003776BF9
Ankyrin repeat protein {ECO:0000313|EMBL:AIE87049.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_12_curated_23
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(36136..37950)
DNA (1815bp) protein (605aa)
DEAD/DEAH box helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
DEAD/DEAH box helicase domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7F1_SPHTD
DEAD/DEAH box helicase domain-containing protein {ECO:0000313|EMBL:AIE85332.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_12_curated_24
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

38065..39021
DNA (957bp) protein (319aa)
Candidate chitinase Glycoside hydrolase family 18 n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FC89_FLAJ1
Glycoside hydrolase family protein {ECO:0000313|EMBL:AIE84403.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
glycoside hydrolase
SCNpilot_expt_500_bf_scaffold_12_curated_25
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39018..39650
DNA (633bp) protein (211aa)
Chloramphenicol phosphotransferase protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UFZ8_9RHIZ
Chloramphenicol phosphotransferase protein {ECO:0000313|EMBL:ENN89068.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
chloramphenicol phosphotransferase family protein
SCNpilot_expt_500_bf_scaffold_12_curated_26
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

39640..40803
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037C8583
Putative esterase {ECO:0000313|EMBL:AIE85980.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
esterase; K07214 enterochelin esterase and related enzymes
SCNpilot_expt_500_bf_scaffold_12_curated_27
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(40859..42220)
DNA (1362bp) protein (454aa)
Aminopeptidase C (EC:3.4.22.40)
Aminopeptidase C n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EXC7_9BACT
Cysteine aminopeptidase {ECO:0000313|EMBL:AIE87411.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_12_curated_28
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

42355..43308
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037C20CD
Uncharacterized protein {ECO:0000313|EMBL:AIE84711.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_12_curated_29
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

43319..44482
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BH73_ZUNPS
Uncharacterized protein {ECO:0000313|EMBL:AIE85459.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_12_curated_30
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

44622..47033
DNA (2412bp) protein (804aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021N3_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:AIE84662.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein; K09955 hypothetical protein
Displaying items 1-30 of 910 in total

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