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SCNpilot_bf_inoc_scaffold_312_curated

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_312_curated_1
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1536
DNA (1536bp) protein (512aa)
Ig-like domain-containing surface protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W942_DESOD
Ig-like domain-containing surface protein {ECO:0000313|EMBL:AET68683.1}; Flags: Precursor;; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_312_curated_2
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2243..2794)
DNA (552bp) protein (184aa)
Putative toxin-antitoxin system, toxin component, Fic family n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FXG9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AKH95219.1}; TaxID=1352940 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica FMS-007.;"
kila-n, DNA-binding domain
SCNpilot_bf_inoc_scaffold_312_curated_3

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comp(2882..3088)
DNA (207bp) protein (69aa)
Protein containing KilA-N, DNA-binding domain protein (Fragment) n=1 Tax=human gut metagenome RepID=K1RP35_9ZZZZ
hypothetical protein
Protein containing KilA-N, DNA-binding domain protein {ECO:0000313|EMBL:EKC45289.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
SCNpilot_bf_inoc_scaffold_312_curated_4
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3185..3661)
DNA (477bp) protein (159aa)
SsrA-binding protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2N6_PALPW
ssra-binding protein; K03664 SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_312_curated_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3870..4472
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2N5_PALPW
hypothetical protein; K08999 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78979.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_312_curated_6
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


4555..7119
DNA (2565bp) protein (855aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
DNA gyrase subunit a (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3]
DNA gyrase subunit A n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2N1_PALPW
SCNpilot_bf_inoc_scaffold_312_curated_7
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7172..8395
DNA (1224bp) protein (408aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2N0_PALPW
hypothetical protein
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:ADQ78974.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_312_curated_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8690..9106
DNA (417bp) protein (139aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L5W7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS01675.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
SCNpilot_bf_inoc_scaffold_312_curated_9
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9150..10097)
DNA (948bp) protein (316aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:ADQ79046.1}; EC=2.7.6.1 {ECO:0000313|EMBL:ADQ79046.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2V2_PALPW
SCNpilot_bf_inoc_scaffold_312_curated_10
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10191..11273)
DNA (1083bp) protein (361aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
3-isopropylmalate dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0U5_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_312_curated_11
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11441..12973)
DNA (1533bp) protein (511aa)
(r)-citramalate synthase (EC:2.3.1.182); K09011 D-citramalate synthase [EC:2.3.1.182]
(R)-citramalate synthase {ECO:0000313|EMBL:ADQ78218.1}; EC=2.3.1.182 {ECO:0000313|EMBL:ADQ78218.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
(R)-citramalate synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0U3_PALPW
SCNpilot_bf_inoc_scaffold_312_curated_12
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13007..13603)
DNA (597bp) protein (199aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
3-isopropylmalate dehydratase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase small subunit n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IST4_9PORP
SCNpilot_bf_inoc_scaffold_312_curated_13
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13695..15086)
DNA (1392bp) protein (464aa)
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase, large subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0U0_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_312_curated_14
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15202..16695)
DNA (1494bp) protein (498aa)
2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13]
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
2-isopropylmalate synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0T9_PALPW
SCNpilot_bf_inoc_scaffold_312_curated_15
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16959..17906)
DNA (948bp) protein (316aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1Q4_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_312_curated_16
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17930..18781)
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1W4_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78708.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_312_curated_17
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19057..19542
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1W5_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78709.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_312_curated_18
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19633..21819
DNA (2187bp) protein (729aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2ARP9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB60168.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
TonB-dependent outer membrane receptor protein
SCNpilot_bf_inoc_scaffold_312_curated_19
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21976..22296
DNA (321bp) protein (107aa)
Heavy metal-associated domain protein n=2 Tax=Bacteroides RepID=E2NJ57_9BACE
Possible exported heavy-metal binding protein {ECO:0000313|EMBL:GAE86295.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;"
heavy-metal binding protein
SCNpilot_bf_inoc_scaffold_312_curated_20
unknown

Not on your lists

22436..22660
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_312_curated_21
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(22810..25050)
DNA (2241bp) protein (747aa)
Putative uncharacterized protein id=4666319 bin=GWF2_Bacteroidetes_35_48 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
SCNpilot_bf_inoc_scaffold_312_curated_22
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25156..26118)
DNA (963bp) protein (321aa)
GSCFA domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1X0_PALPW
gscfa domain protein
GSCFA domain protein {ECO:0000313|EMBL:ADQ78714.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_312_curated_23
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(26303..28495)
DNA (2193bp) protein (731aa)
SSU ribosomal protein S1P n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T141_PALPW
SSU ribosomal protein s1p; K02945 small subunit ribosomal protein S1
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_312_curated_24
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28626..30020)
DNA (1395bp) protein (465aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T406_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79450.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_312_curated_25
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30052..30864)
DNA (813bp) protein (271aa)
glycogen synthase (EC:2.4.1.21); K00703 starch synthase [EC:2.4.1.21]
Glycogen synthase (UDP-glucose) {ECO:0000313|EMBL:ADQ79449.1}; EC=2.4.1.21 {ECO:0000313|EMBL:ADQ79449.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Glycogen synthase (UDP-glucose) n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T405_PALPW
SCNpilot_bf_inoc_scaffold_312_curated_26
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31006..31851
DNA (846bp) protein (282aa)
pantothenate synthetase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1]
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Pantothenate synthetase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T404_PALPW
SCNpilot_bf_inoc_scaffold_312_curated_27
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31842..32195
DNA (354bp) protein (118aa)
aspartate alpha-decarboxylase (EC:4.1.1.11); K01579 aspartate 1-decarboxylase [EC:4.1.1.11]
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
Aspartate 1-decarboxylase n=3 Tax=Parabacteroides RepID=K5ZMX9_9PORP
SCNpilot_bf_inoc_scaffold_312_curated_28
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32236..33366
DNA (1131bp) protein (377aa)
tRNA-guanine transglycosylase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
Queuine tRNA-ribosyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T401_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_312_curated_29
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33434..36991)
DNA (3558bp) protein (1186aa)
pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase [EC:1.2.7.-]
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1D7_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_312_curated_30
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37022..38197)
DNA (1176bp) protein (392aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1D8_PALPW
hypothetical protein; K07133
Uncharacterized protein {ECO:0000313|EMBL:ADQ78532.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Displaying items 1-30 of 52 in total

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