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SCNpilot_bf_inoc_scaffold_726_curated

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_726_curated_1
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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103..831
DNA (729bp) protein (243aa)
Urea transporter n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G1G1_9SPHI
Urea transporter {ECO:0000313|EMBL:EEI90870.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
Urea transporter; K08717 urea transporter
SCNpilot_bf_inoc_scaffold_726_curated_2
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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942..2996
DNA (2055bp) protein (685aa)
Heat shock protein Hsp90 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T526_PALPW
heat shock protein hsp90; K04079 molecular chaperone HtpG
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_726_curated_3
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3076..4536)
DNA (1461bp) protein (487aa)
Cell cycle protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T654_PALPW
cell cycle protein; K05837 rod shape determining protein RodA
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_726_curated_4
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4520..6355)
DNA (1836bp) protein (612aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K05515 penicillin-binding protein 2
Peptidoglycan glycosyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T653_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_726_curated_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6358..6855)
DNA (498bp) protein (166aa)
Rod shape-determining protein MreD n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T652_PALPW
rod shape-determining protein mred
Rod shape-determining protein MreD {ECO:0000313|EMBL:ADQ80196.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_726_curated_6
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6855..7613)
DNA (759bp) protein (253aa)
Rod shape-determining protein MreC n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T651_PALPW
rod shape-determining protein mrec; K03570 rod shape-determining protein MreC
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_726_curated_7
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7732..8751)
DNA (1020bp) protein (340aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T650_PALPW
cell shape determining protein, mreb/mrl family; K03569 rod shape-determining protein MreB and related proteins
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_726_curated_8
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8758..10278)
DNA (1521bp) protein (507aa)
imp cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:2.1.2.3 3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T649_PALPW
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_726_curated_9
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10512..10865)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6RBY1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA52693.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_726_curated_10
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(10914..11345)
DNA (432bp) protein (144aa)
hypothetical protein ANA_C20489 id=1863101 bin=GWD2_Bacteroidetes_40_43 species=Anabaena sp. 90 genus=Anabaena taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
Tax=GWE2_Bacteroidetes_40_63_curated
SCNpilot_bf_inoc_scaffold_726_curated_11
unknown

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11446..11637
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_726_curated_12
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(11607..11852)
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000378BE72
hypothetical protein; K07133
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_726_curated_13
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12167..12928)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T233_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78777.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_726_curated_14
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12933..14201)
DNA (1269bp) protein (423aa)
Radical SAM domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T234_PALPW
radical sam domain protein
Radical SAM domain protein {ECO:0000313|EMBL:ADQ78778.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_726_curated_15
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(14280..15623)
DNA (1344bp) protein (448aa)
Putative uncharacterized protein id=4582220 bin=GWF2_Bacteroidetes_35_48 species=Parabacteroides distasonis genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
permease
Tax=GWF2_Bacteroidetes_33_38_curated
SCNpilot_bf_inoc_scaffold_726_curated_16
Prevotella sp. CAG:5226, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(15651..16064)
DNA (414bp) protein (138aa)
arsenate reductase; K03741 arsenate reductase [EC:1.20.4.1]
Putative Arsenate reductase n=1 Tax=Prevotella sp. CAG:5226 RepID=R6A272_9BACT
Putative Arsenate reductase {ECO:0000313|EMBL:CDA45918.1}; TaxID=1262930 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:5226.;"
SCNpilot_bf_inoc_scaffold_726_curated_17
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(16077..16781)
DNA (705bp) protein (235aa)
Cytochrome c biogenesis protein transmembrane region id=4582219 bin=GWF2_Bacteroidetes_35_48 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
cytochrome c biogenesis protein transmembrane region
Tax=GWF2_Bacteroidetes_33_38_curated
SCNpilot_bf_inoc_scaffold_726_curated_18
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(16787..17236)
DNA (450bp) protein (150aa)
Thioredoxin fold protein id=4582217 bin=GWF2_Bacteroidetes_35_48 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
SCNpilot_bf_inoc_scaffold_726_curated_19
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(17233..17574)
DNA (342bp) protein (114aa)
regulatory protein ArsR id=4125227 bin=GWF2_Bacteroidetes_41_9 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_33_38_curated
SCNpilot_bf_inoc_scaffold_726_curated_20
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(17567..17812)
DNA (246bp) protein (82aa)
Redox-active disulfide protein 2 id=4582215 bin=GWF2_Bacteroidetes_35_48 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=GWF2_Bacteroidetes_33_38_curated
SCNpilot_bf_inoc_scaffold_726_curated_21
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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18086..19192
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003771937
Uncharacterized protein {ECO:0000313|EMBL:EGK02146.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
RND family efflux transporter, MFP subunit
SCNpilot_bf_inoc_scaffold_726_curated_22
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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19205..22240
DNA (3036bp) protein (1012aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X236_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05852.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
multidrug efflux membrane fusion protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family rbh
SCNpilot_bf_inoc_scaffold_726_curated_23
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22262..23578
DNA (1317bp) protein (439aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X237_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05853.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
outer membrane protein TolC
SCNpilot_bf_inoc_scaffold_726_curated_24
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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23757..24068
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZKQ7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EON74675.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
helix-turn-helix domain protein
SCNpilot_bf_inoc_scaffold_726_curated_25
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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24065..24244
DNA (180bp) protein (60aa)
hypothetical protein AberL1_10010 id=2978794 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Acinetobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_Flavobacteriales_35_8
SCNpilot_bf_inoc_scaffold_726_curated_26
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24361..25047
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Bacteroides intestinalis CAG:315 RepID=R7DUZ9_9BACE
hypothetical protein
Tax=BJP_08E140C01_Flavobacteriales_35_8
SCNpilot_bf_inoc_scaffold_726_curated_27
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

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25297..25776
DNA (480bp) protein (160aa)
Type III restriction protein res subunit n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IZA6_CYCMS
type III restriction protein res subunit
Tax=GWA2_Bacteroidetes_31_9_curated
Displaying 27 items

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