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SCNpilot_bf_inoc_scaffold_821_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_821_curated_1
unknown

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163..1029
DNA (867bp) protein (289aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_821_curated_2
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1210..2358
DNA (1149bp) protein (383aa)
TDP-4-keto-6-deoxy-D-glucose transaminase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3K1_PALPW
tdp-4-ketO-6-deoxy-d-glucose transaminase; K02805 lipopolysaccharide biosynthesis protein
TDP-4-keto-6-deoxy-D-glucose transaminase {ECO:0000313|EMBL:ADQ79295.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_821_curated_3
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2351..3805
DNA (1455bp) protein (485aa)
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_821_curated_4
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4239..5492)
DNA (1254bp) protein (418aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB52616.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
HipA domain-containing protein id=4097404 bin=GWF2_Bacteroidetes_40_14 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
HipA domain-containing protein
SCNpilot_bf_inoc_scaffold_821_curated_5
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5496..5849)
DNA (354bp) protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB52617.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
hypothetical protein MsalJ2_04296 id=4097401 bin=GWF2_Bacteroidetes_40_14 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
helix-turn-helix domain-containing protein
SCNpilot_bf_inoc_scaffold_821_curated_6
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6062..7000
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003813FA7
Uncharacterized protein {ECO:0000313|EMBL:KJJ38203.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
glycosyl transferase family protein
SCNpilot_bf_inoc_scaffold_821_curated_7
Mucinivorans hirudinis, Mucinivorans, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7552..8682
DNA (1131bp) protein (377aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AWJ7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDN31913.1}; TaxID=1433126 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Mucinivorans.;" source="Mucinivorans hirudinis.;"
Predicted ATPase (AAA+ superfamily)
SCNpilot_bf_inoc_scaffold_821_curated_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8867..10006
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BD11_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84643.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Archaeal ATPase.
SCNpilot_bf_inoc_scaffold_821_curated_9
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10015..10992
DNA (978bp) protein (326aa)
Glycosyl transferase, group 2 family n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JD72_9BACT
family 2 glycosyl transferase
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_821_curated_10
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11130..12149
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Odoribacter sp. CAG:788 RepID=R5PKM5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCZ09487.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_821_curated_11
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12327..12698
DNA (372bp) protein (124aa)
Uncharacterized protein id=4841195 bin=GWC2_Bacteroidetes_40_13 species=Belliella baltica genus=Belliella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_821_curated_12
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12810..14105
DNA (1296bp) protein (432aa)
ATPase n=1 Tax=Bacteroidales bacterium CF RepID=U5Q7D4_9BACT
hypothetical protein
ATPase {ECO:0000313|EMBL:AGY54457.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
SCNpilot_bf_inoc_scaffold_821_curated_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14252..15187
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LFN5_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44499.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
SCNpilot_bf_inoc_scaffold_821_curated_14
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15184..16059
DNA (876bp) protein (292aa)
Glycosyl transferase family 11 n=1 Tax=Tannerella sp. CAG:118 RepID=R5IPH9_9PORP
Glycosyl transferase family 11 {ECO:0000313|EMBL:CCY38847.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
glycosyl transferase family protein
SCNpilot_bf_inoc_scaffold_821_curated_15
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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16061..17170
DNA (1110bp) protein (370aa)
Group 1 family glycosyl transferase n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JCL5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KGN79128.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium COT-184 OH4590.;"
glycosyltransferase
SCNpilot_bf_inoc_scaffold_821_curated_16
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17170..18597
DNA (1428bp) protein (476aa)
Putative uncharacterized protein n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JCL4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KGN79129.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium COT-184 OH4590.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_821_curated_17
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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18709..19638
DNA (930bp) protein (310aa)
Glycosyl transferase group 1 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3I0_PALPW
group 1 glycosyl transferase
Uncharacterized protein {ECO:0000313|EMBL:KGN79130.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium COT-184 OH4590.;"
SCNpilot_bf_inoc_scaffold_821_curated_18
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19712..20746
DNA (1035bp) protein (345aa)
Virulence protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZUL7_9FIRM
Virulence protein
Virulence protein {ECO:0000313|EMBL:CDA40059.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
SCNpilot_bf_inoc_scaffold_821_curated_19
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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20743..21750
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3H9_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79273.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_821_curated_20
Smithella sp. SC_K08D17, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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21753..22847
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Bacteroides gallinarum RepID=UPI0003638E21
Uncharacterized protein {ECO:0000313|EMBL:KIE18429.1}; TaxID=1487949 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SC_K08D17.;"
hypothetical protein
Displaying 20 items

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