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scnpilot_expt_750_p_scaffold_1570_curated

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_1570_curated_1
unknown

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comp(239..367)
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1570_curated_2
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(383..1615)
DNA (1233bp) protein (411aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=E2NJJ4_9BACE
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEF87914.1}; TaxID=537012 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus DSM 14838.;"
bacteriophage integrase
scnpilot_expt_750_p_scaffold_1570_curated_3
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2300..2545)
DNA (246bp) protein (82aa)
Helix-turn-helix domain protein n=1 Tax=Odoribacter laneus CAG:561 RepID=R5UXW7_9PORP
Helix-turn-helix domain protein {ECO:0000313|EMBL:CCZ80579.1}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter laneus CAG:561.;"
scnpilot_expt_750_p_scaffold_1570_curated_4
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2665..4344
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=Odoribacter laneus CAG:561 RepID=R5URA5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCZ80580.1}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter laneus CAG:561.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1570_curated_5
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4380..5423
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RIZ7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA56460.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
scnpilot_expt_750_p_scaffold_1570_curated_6
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6117..6389
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7ITB6_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI08066.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1570_curated_7
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6392..6829
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Alistipes sp. JC136 RepID=UPI000287F3AF
Uncharacterized protein {ECO:0000313|EMBL:EFR56844.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1570_curated_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6842..7609
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Y5L7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08442.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
excinuclease ABC C subunit domain-containing protein; K09968 hypothetical protein
scnpilot_expt_750_p_scaffold_1570_curated_9
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7682..8020)
DNA (339bp) protein (113aa)
DNA binding domain protein excisionase family n=1 Tax=Odoribacter laneus CAG:561 RepID=R5UXX1_9PORP
DNA binding domain protein excisionase family {ECO:0000313|EMBL:CCZ80584.1}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter laneus CAG:561.;"
scnpilot_expt_750_p_scaffold_1570_curated_10
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8109..9302)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Odoribacter laneus CAG:561 RepID=R5URA9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCZ80585.1}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter laneus CAG:561.;"
Integrase
scnpilot_expt_750_p_scaffold_1570_curated_11
Prevotella sp. ICM33, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10086..10298
DNA (213bp) protein (71aa)
transcriptional regulator n=1 Tax=Prevotella veroralis RepID=UPI00036D634B
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ETT03247.1}; TaxID=1161412 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. ICM33.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1570_curated_12
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

10316..13516
DNA (3201bp) protein (1067aa)
Putative ATP-dependent helicase yqhH n=1 Tax=Bacteroidales bacterium CF RepID=U5Q2L7_9BACT
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
scnpilot_expt_750_p_scaffold_1570_curated_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13576..14193
DNA (618bp) protein (206aa)
Uncharacterized protein {ECO:0000313|EMBL:EXZ52877.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
Uncharacterized protein id=4314209 bin=GWF2_Bacteroidetes_40_14 species=gut metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
scnpilot_expt_750_p_scaffold_1570_curated_14
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14190..15182
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI00036C400C
Uncharacterized protein {ECO:0000313|EMBL:EFR58321.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Domain of unknown function (DUF1814).
scnpilot_expt_750_p_scaffold_1570_curated_15
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15182..15925
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Bacteroidales bacterium CF RepID=U5Q2G3_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY52757.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
scnpilot_expt_750_p_scaffold_1570_curated_16
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

15928..16359
DNA (432bp) protein (144aa)
Type III restriction-modification system StyLTI enzyme mod n=1 Tax=Bacteroidales bacterium CF RepID=U5Q5Y6_9BACT
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
scnpilot_expt_750_p_scaffold_1570_curated_17
Bartonella tribocorum, Bartonella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16319..17845
DNA (1527bp) protein (509aa)
mod2; type III restriction system methylase (EC:2.1.1.72); K07316 adenine-specific DNA-methyltransferase [EC:2.1.1.72]
Type III restriction system methylase {ECO:0000313|EMBL:CAK02180.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CAK02180.1};; TaxID=382640 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; Bartonella.;" source="Bartonella tribocorum (strain CIP 105476 / IBS 506).;"
Type III restriction system methylase n=1 Tax=Bartonella tribocorum (strain CIP 105476 / IBS 506) RepID=A9IXI2_BART1
scnpilot_expt_750_p_scaffold_1570_curated_18
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17859..18758
DNA (900bp) protein (300aa)
Type III restriction-modification system enzyme res {ECO:0000313|EMBL:AGY52761.1}; EC=3.1.21.5 {ECO:0000313|EMBL:AGY52761.1};; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
Type III restriction-modification system enzyme res n=1 Tax=Bacteroidales bacterium CF RepID=U5Q2M2_9BACT
hypothetical protein
Displaying 18 items

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