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scnpilot_expt_750_p_scaffold_1665_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_1665_curated_1
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(118..1065)
DNA (948bp) protein (316aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
cysteine synthase; K01738 cysteine synthase A [EC:2.5.1.47]
Cysteine synthase A n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J201_9PORP
scnpilot_expt_750_p_scaffold_1665_curated_2
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1167..2090)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KIS3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF13157.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1665_curated_3
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2119..3525)
DNA (1407bp) protein (469aa)
bleomycin hydrolase (EC:3.4.22.40); K01372 bleomycin hydrolase [EC:3.4.22.40]
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WZM4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03892.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_expt_750_p_scaffold_1665_curated_4
Bacteroides sp. CAG:443, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3532..4230)
DNA (699bp) protein (233aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=1262739 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:443.;"
NAD-dependent deacetylase; K12410 NAD-dependent deacetylase [EC:3.5.1.-]
NAD-dependent protein deacylase n=1 Tax=Bacteroides sp. CAG:443 RepID=R6NTE5_9BACE
scnpilot_expt_750_p_scaffold_1665_curated_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4513..5097
DNA (585bp) protein (195aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
FKBP-type peptidyl-prolyl cis-trans isomerase; K03773 FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=4 Tax=Parabacteroides RepID=A7AI90_9PORP
scnpilot_expt_750_p_scaffold_1665_curated_6
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5128..6168
DNA (1041bp) protein (347aa)
peptidyl-prolyl isomerase; K01802 peptidylprolyl isomerase [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WXS8_9PORP
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_expt_750_p_scaffold_1665_curated_7
unknown

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comp(6133..6339)
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1665_curated_8
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6378..6842
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WXS7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04530.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
scnpilot_expt_750_p_scaffold_1665_curated_9
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6969..8063
DNA (1095bp) protein (365aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
Putative GTP cyclohydrolase 1 type 2 n=2 Tax=Dysgonomonas RepID=F8X149_9PORP
hypothetical protein
scnpilot_expt_750_p_scaffold_1665_curated_10
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8189..8947
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IW85_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02885.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein; K07164
scnpilot_expt_750_p_scaffold_1665_curated_11
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9458..10393)
DNA (936bp) protein (312aa)
HipA-like C-terminal domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1]
HipA domain protein n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZRU1_9BACE
HipA protein {ECO:0000313|EMBL:GAE85770.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;"
scnpilot_expt_750_p_scaffold_1665_curated_12
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10386..10718)
DNA (333bp) protein (111aa)
HipA n=1 Tax=human gut metagenome RepID=K1SBG6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:GAE85769.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;"
HipA N-terminal domain
scnpilot_expt_750_p_scaffold_1665_curated_13
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(11265..13559)
DNA (2295bp) protein (765aa)
Alpha-1,2-mannosidase id=2499325 bin=GWA2_Bacteroidetes_42_15 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
alpha-1,2-mannosidase
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_expt_750_p_scaffold_1665_curated_14
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(13825..15087)
DNA (1263bp) protein (421aa)
GLUG domain protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R2Q7_SPISS
GLUG domain-containing protein
GLUG domain protein {ECO:0000313|EMBL:ADK80339.1}; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
scnpilot_expt_750_p_scaffold_1665_curated_15
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15206..17038)
DNA (1833bp) protein (611aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J3S1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99619.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein rbh
scnpilot_expt_750_p_scaffold_1665_curated_16
Bacteroides faecis CAG:32, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(17051..17635)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Bacteroides faecis CAG:32 RepID=R6W2E0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC88467.1}; TaxID=1263044 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides faecis CAG:32.;"
hypothetical protein
Displaying 16 items

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