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scnpilot_expt_750_p_scaffold_1953_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_1953_curated_1
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..1815)
DNA (1815bp) protein (605aa)
ABC transporter ATP-binding protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-]
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2T9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05629.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_expt_750_p_scaffold_1953_curated_2
unknown

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1821..2012
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1953_curated_3
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2203..2574
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J0E4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01022.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1953_curated_4
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2727..3482)
DNA (756bp) protein (252aa)
succinate dehydrogenase/fumarate reductase iron-sulfur subunit; K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X080_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03775.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_expt_750_p_scaffold_1953_curated_5
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3594..5552)
DNA (1959bp) protein (653aa)
succinate dehydrogenase subunit a (EC:1.3.5.1 1.3.99.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1]
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X079_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03774.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_expt_750_p_scaffold_1953_curated_6
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5603..6319)
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X078_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03773.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
sdhC; succinate dehydrogenase cytochrome B subunit, b558 family; K00241 succinate dehydrogenase cytochrome b556 subunit
scnpilot_expt_750_p_scaffold_1953_curated_7
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7087..8325
DNA (1239bp) protein (413aa)
Cof-like hydrolase n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I8XMN8_9BACE
Cof-like hydrolase {ECO:0000313|EMBL:EIY52165.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
uncharacterized domain 1
scnpilot_expt_750_p_scaffold_1953_curated_8
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8389..9495
DNA (1107bp) protein (369aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IXD4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02117.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
NADH:flavin oxidoreductase
scnpilot_expt_750_p_scaffold_1953_curated_9
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9590..9850)
DNA (261bp) protein (87aa)
50S ribosomal protein L31 type B n=1 Tax=Tannerella sp. CAG:118 RepID=R5IAC4_9PORP
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
rpmE2; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31
scnpilot_expt_750_p_scaffold_1953_curated_10
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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10144..11325
DNA (1182bp) protein (394aa)
Uncharacterized protein n=2 Tax=Elizabethkingia anophelis RepID=L8K6B4_9FLAO
6-phosphogluconolactonase {ECO:0000313|EMBL:AKH94939.1}; TaxID=1352940 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica FMS-007.;"
3-carboxymuconate cyclase
scnpilot_expt_750_p_scaffold_1953_curated_11
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11435..12835
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Dysgonomonas mossii RepID=UPI00036DF40C
Uncharacterized protein {ECO:0000313|EMBL:EGK03898.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1953_curated_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13270..13545
DNA (276bp) protein (92aa)
DNA-binding protein HU n=18 Tax=Bacteroides RepID=Q64W23_BACFR
hup1; histone-like DNA-binding protein HU1; K03530 DNA-binding protein HU-beta
Bacterial DNA-binding family protein {ECO:0000313|EMBL:EXZ54417.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
scnpilot_expt_750_p_scaffold_1953_curated_13
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13834..14955
DNA (1122bp) protein (374aa)
ribonuclease G; K08301 ribonuclease G [EC:3.1.26.-]
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WX08_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06165.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
Displaying 13 items

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