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scnpilot_expt_750_p_scaffold_2043_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_2043_curated_1
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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2..1051
DNA (1050bp) protein (350aa)
Autotransporter adhesin id=3642892 bin=GWF2_Bacteroidetes_41_31 species=Rhodospirillum photometricum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_41_31_curated
scnpilot_expt_750_p_scaffold_2043_curated_2
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1333..2976)
DNA (1644bp) protein (548aa)
carboxy-terminal processing protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IY30_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01849.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
scnpilot_expt_750_p_scaffold_2043_curated_3
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3040..3471)
DNA (432bp) protein (144aa)
deoxycytidylate deaminase; K01493 dCMP deaminase [EC:3.5.4.12]
Deoxycytidylate deaminase n=8 Tax=Bacteroidales RepID=A6L8H9_PARD8
Cytidine/deoxycytidylate deaminase family protein {ECO:0000313|EMBL:EFI07372.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
scnpilot_expt_750_p_scaffold_2043_curated_4
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3488..4333)
DNA (846bp) protein (282aa)
Putative nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:CEA16695.1}; EC=2.4.2.19 {ECO:0000313|EMBL:CEA16695.1};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
nadC; nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19); K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VER0_9BACE
scnpilot_expt_750_p_scaffold_2043_curated_5
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4501..5478)
DNA (978bp) protein (326aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11]
6-phosphofructokinase n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IY46_9PORP
scnpilot_expt_750_p_scaffold_2043_curated_6
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5639..6529)
DNA (891bp) protein (297aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X4E3_9PORP
scnpilot_expt_750_p_scaffold_2043_curated_7
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6526..7218)
DNA (693bp) protein (231aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9URE5_9BACE
scnpilot_expt_750_p_scaffold_2043_curated_8
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7392..8393)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZGI8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14774.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_2043_curated_9
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8822..9790
DNA (969bp) protein (323aa)
isoprenoid biosynthesis-like protein; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WXX0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04573.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_expt_750_p_scaffold_2043_curated_10
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9861..10496
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IVG4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02614.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_2043_curated_11
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10493..11263
DNA (771bp) protein (257aa)
deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-]
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IVG3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02613.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
scnpilot_expt_750_p_scaffold_2043_curated_12
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11297..13084)
DNA (1788bp) protein (596aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5YBD1_9PORP
CIC family chloride channel protein {ECO:0000313|EMBL:EOS19861.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
chloride channel protein; K03281 chloride channel protein, CIC family
scnpilot_expt_750_p_scaffold_2043_curated_13
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13193..13765)
DNA (573bp) protein (191aa)
Sua5/YciO/YrdC/YwlC family protein n=7 Tax=Bacteroides RepID=C3PW12_9BACE
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EEO59511.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
translation factor; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein
scnpilot_expt_750_p_scaffold_2043_curated_14
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13749..14102)
DNA (354bp) protein (118aa)
GNAT family acetyltransferase; K00657 diamine N-acetyltransferase [EC:2.3.1.57]
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WZU4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03639.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
Displaying 14 items

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