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scnpilot_expt_750_p_scaffold_2371_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_2371_curated_1
unknown

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comp(1..321)
DNA (321bp) protein (107aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_2371_curated_2
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(591..1118)
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X145_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDN55026.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_2371_curated_3
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1279..2508)
DNA (1230bp) protein (410aa)
Proteinase inhibitor I4 serpin n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T581_PALPW
proteinase inhibitor i4 serpin; K13963 serpin B
Proteinase inhibitor I4 serpin {ECO:0000313|EMBL:ADQ79875.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_expt_750_p_scaffold_2371_curated_4
unknown

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comp(2527..2982)
DNA (456bp) protein (152aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_2371_curated_5
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2988..4178)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AZQ1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB57699.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_2371_curated_6
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4200..4748)
DNA (549bp) protein (183aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T579_PALPW
RNA polymerase, sigma-24 subunit, ecf subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADQ79873.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_expt_750_p_scaffold_2371_curated_7
Chlorobaculum parvum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(5082..5411)
DNA (330bp) protein (110aa)
Cytochrome o ubiquinol oxidase subunit IV n=1 Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QMZ0_CHLP8
cytochrome o ubiquinol oxidase subunit IV; K02300 cytochrome o ubiquinol oxidase operon protein cyoD
Cytochrome o ubiquinol oxidase subunit IV {ECO:0000313|EMBL:ACF11293.1}; TaxID=517417 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.;" source="Chlorobaculum parvum (strain NCIB 8327) (Chlorobium vibrioforme subsp.; thiosulfatophilum (strain DSM 263 / NCIB 8327)).;"
scnpilot_expt_750_p_scaffold_2371_curated_8
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5467..6081)
DNA (615bp) protein (205aa)
Cytochrome o ubiquinol oxidase, subunit III {ECO:0000313|EMBL:EFK11071.1}; EC=1.10.3.- {ECO:0000313|EMBL:EFK11071.1};; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
cyoC; Cytochrome o ubiquinol oxidase subunit III; K02299 cytochrome o ubiquinol oxidase subunit III [EC:1.10.3.-]
Cytochrome o ubiquinol oxidase, subunit III n=1 Tax=delta proteobacterium NaphS2 RepID=D8EZG4_9DELT
scnpilot_expt_750_p_scaffold_2371_curated_9
Chlorobaculum parvum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(6097..8094)
DNA (1998bp) protein (666aa)
cytochrome o ubiquinol oxidase subunit I (EC:1.9.3.1); K02298 cytochrome o ubiquinol oxidase subunit I [EC:1.10.3.-]
Cytochrome o ubiquinol oxidase, subunit I {ECO:0000313|EMBL:ACF11291.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ACF11291.1};; TaxID=517417 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.;" source="Chlorobaculum parvum (strain NCIB 8327) (Chlorobium vibrioforme subsp.; thiosulfatophilum (strain DSM 263 / NCIB 8327)).;"
Cytochrome o ubiquinol oxidase, subunit I n=1 Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QMY8_CHLP8
scnpilot_expt_750_p_scaffold_2371_curated_10
Chlorobaculum parvum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(8091..9125)
DNA (1035bp) protein (345aa)
ubiquinol oxidase subunit II; K02297 cytochrome o ubiquinol oxidase subunit II [EC:1.10.3.-]
Ubiquinol oxidase, subunit II n=1 Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QMY7_CHLP8
Ubiquinol oxidase, subunit II {ECO:0000313|EMBL:ACF11290.1}; TaxID=517417 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.;" source="Chlorobaculum parvum (strain NCIB 8327) (Chlorobium vibrioforme subsp.; thiosulfatophilum (strain DSM 263 / NCIB 8327)).;"
scnpilot_expt_750_p_scaffold_2371_curated_11
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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10000..10860
DNA (861bp) protein (287aa)
cyoE; Protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-]
Protoheme IX farnesyltransferase id=3008320 bin=GWF2_Bacteroidetes_41_31 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Tax=GWF2_Bacteroidetes_41_31_curated
scnpilot_expt_750_p_scaffold_2371_curated_12
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11510..12184
DNA (675bp) protein (225aa)
ribonucleoside-triphosphate reductase class III catalytic subunit (EC:1.17.4.2); K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2]
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WW30_9PORP
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EGK06645.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
Displaying 12 items

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