ggKbase home page

scnpilot_expt_750_p_scaffold_2744_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_2744_curated_1
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(1..1950)
DNA (1950bp) protein (650aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7]
alanyl-tRNA synthetase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000373EF47
scnpilot_expt_750_p_scaffold_2744_curated_2
Bacteroidetes oral taxon 274, Bacteroidetes, Bacteria

Not on your lists

comp(2303..3160)
DNA (858bp) protein (286aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JF14_9BACT
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EFI16825.1}; TaxID=575590 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes oral taxon 274 str. F0058.;"
NmrA family protein
scnpilot_expt_750_p_scaffold_2744_curated_3
unknown

Not on your lists

comp(3290..3448)
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_2744_curated_4
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4236..5540
DNA (1305bp) protein (435aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
metK; methionine adenosyltransferase; K00789 S-adenosylmethionine synthetase [EC:2.5.1.6]
S-adenosylmethionine synthase n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IW70_9PORP
scnpilot_expt_750_p_scaffold_2744_curated_5
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5622..6209
DNA (588bp) protein (196aa)
TIGR00730 family protein n=3 Tax=Bacteroides RepID=I8ZNY0_BACUN
TIGR00730 family protein {ECO:0000313|EMBL:CDE03323.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein; K06966
scnpilot_expt_750_p_scaffold_2744_curated_6
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6226..7179
DNA (954bp) protein (318aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IW69_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02869.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_2744_curated_7
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7176..7946
DNA (771bp) protein (257aa)
uroporphyrinogen-III synthase; K01719 uroporphyrinogen-III synthase [EC:4.2.1.75]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000368488E
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:EGK03970.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_expt_750_p_scaffold_2744_curated_8
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8038..10386
DNA (2349bp) protein (783aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J0L8_9PORP
scnpilot_expt_750_p_scaffold_2744_curated_9
unknown

Not on your lists

10405..10500
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 9 items

View Taxonomy