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scnpilot_expt_750_p_scaffold_2814_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_2814_curated_1
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..309)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X3Q7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05367.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_2814_curated_2
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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914..1483
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X3Q9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05369.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_2814_curated_3
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1604..2089
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X3R0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05370.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
mobilization protein
scnpilot_expt_750_p_scaffold_2814_curated_4
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2055..3002
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X3R1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05371.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
mobilization protein BmgA
scnpilot_expt_750_p_scaffold_2814_curated_5
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3035..3577
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X3R2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05372.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_expt_750_p_scaffold_2814_curated_6
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3674..3877
DNA (204bp) protein (68aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L7V2_BACV8
Transcriptional regulator {ECO:0000313|EMBL:GAE84967.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_2814_curated_7
Bacteroides intestinalis CAG:564, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3956..5383
DNA (1428bp) protein (476aa)
putative type I restriction-modification system, M subunit; K03427 type I restriction enzyme M protein [EC:2.1.1.72]
DNA methyltransferase n=1 Tax=Prevotella oris RepID=UPI00036B9598
Putative type I restriction-modification system M subunit {ECO:0000313|EMBL:CCY85161.1}; TaxID=1263049 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:564.;"
scnpilot_expt_750_p_scaffold_2814_curated_8

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5430..6422
DNA (993bp) protein (331aa)
Tyrosine recombinase XerC n=1 Tax=gut metagenome RepID=J9GLD6_9ZZZZ
Tyrosine recombinase XerC {ECO:0000313|EMBL:EJX08697.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
site-specific recombinase, phage integrase family
scnpilot_expt_750_p_scaffold_2814_curated_9
Bacteroides sp. CAG:530, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6506..7138
DNA (633bp) protein (211aa)
type I restriction modification DNA specificity domain protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3]
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00036F86DB
Restriction modification system DNA specificity subunit {ECO:0000313|EMBL:CDA75703.1}; TaxID=1262741 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:530.;"
scnpilot_expt_750_p_scaffold_2814_curated_10
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7122..8318
DNA (1197bp) protein (399aa)
Restriction modification system DNA specificity domain protein n=1 Tax=Bacteroides sp. CAG:714 RepID=R6ZSI4_9BACE
Restriction modification system DNA specificity domain protein {ECO:0000313|EMBL:CDD33437.1}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:714.;"
restriction modification system DNA specificity subunit
scnpilot_expt_750_p_scaffold_2814_curated_11
Enterococcus gallinarum, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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8329..8829
DNA (501bp) protein (167aa)
restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3]
Uncharacterized protein (Fragment) n=1 Tax=Enterococcus gallinarum EGD-AAK12 RepID=U1D9X8_ENTGA
Uncharacterized protein {ECO:0000313|EMBL:ERE62371.1}; Flags: Fragment;; TaxID=1357296 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus gallinarum EGD-AAK12.;"
scnpilot_expt_750_p_scaffold_2814_curated_12
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8830..9468
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=E2NHH9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEF88640.1}; TaxID=537012 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus DSM 14838.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_2814_curated_13
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9480..10211
DNA (732bp) protein (244aa)
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:EEF88638.1}; EC=3.1.21.3 {ECO:0000313|EMBL:EEF88638.1};; TaxID=537012 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus DSM 14838.;"
hsdR_1; type I site-specific deoxyribonuclease, HsdR family (EC:3.1.21.3); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3]
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=E2NHH7_9BACE
Displaying 13 items

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