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scnpilot_expt_750_p_scaffold_3852_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_3852_curated_1
Gammaproteobacteria bacterium MFB021, Gammaproteobacteria, Proteobacteria, Bacteria

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1..441
DNA (441bp) protein (147aa)
DNA polymerase III subunit alpha protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2ERW1_9GAMM
Tellurium resistance protein TerC {ECO:0000313|EMBL:KFF49683.1}; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
Integral membrane protein TerC; K05794 tellurite resistance protein TerC
scnpilot_expt_750_p_scaffold_3852_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(479..1012)
DNA (534bp) protein (178aa)
hypothetical protein; K15637 serine/threonine-protein phosphatase PGAM5 [EC:3.1.3.16]
Phosphoglycerate mutase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3L5_9GAMM
Phosphoglycerate mutase {ECO:0000313|EMBL:EIL94056.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_expt_750_p_scaffold_3852_curated_3
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1794..2879
DNA (1086bp) protein (362aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
aldose 1-epimerase; K01785 aldose 1-epimerase [EC:5.1.3.3]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000360358D
scnpilot_expt_750_p_scaffold_3852_curated_4
Bacteroidetes bacterium oral taxon 272, Bacteroidetes, Bacteria

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2895..4235
DNA (1341bp) protein (447aa)
Transporter, major facilitator family protein n=1 Tax=Bacteroidetes bacterium oral taxon 272 str. F0290 RepID=S8FGZ4_9BACT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EPT33133.1}; TaxID=888054 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes bacterium oral taxon 272 str. F0290.;"
fucose permease
scnpilot_expt_750_p_scaffold_3852_curated_5
Ornithobacterium rhinotracheale, Ornithobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4413..5564
DNA (1152bp) protein (384aa)
Galactokinase n=1 Tax=Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) RepID=I4A2M2_ORNRL
galactokinase
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=867902 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Ornithobacterium.;" source="Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG; 23171 / LMG 9086).;"
scnpilot_expt_750_p_scaffold_3852_curated_6
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5654..6343
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J3C2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99780.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
nudix hydrolase
scnpilot_expt_750_p_scaffold_3852_curated_7
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6509..7198
DNA (690bp) protein (230aa)
araD; L-ribulose-5-phosphate 4-epimerase (EC:5.1.3.4); K03077 L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] rbh
L-ribulose-5-phosphate 4-epimerase n=2 Tax=Dysgonomonas RepID=F8X1K2_9PORP
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EGK05986.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_expt_750_p_scaffold_3852_curated_8
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7357..7533
DNA (177bp) protein (59aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
L-arabinose isomerase (EC:5.3.1.4); K01804 L-arabinose isomerase [EC:5.3.1.4]
L-arabinose isomerase n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EHA6_9BACE
Displaying 8 items

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